| Literature DB >> 24046579 |
Piskala Subburaman Kannan1, Ayyakannu Sundaram Ganeshraja, Kanniah Rajkumar, Krishnamoorthy Anbalagan, Arunachalatheva Subbiahpandi.
Abstract
The whole mol-ecule of the title compound, [NiCl2(C3H4N2)2(NH3)2], is generated by inversion symmetry. The Ni(II) ion, which is located on an inversion center, has a distorted octa-hedral coordination environment and is surrounded by two ammine N atoms and two Cl atoms in the equatorial plane, with two N atoms of two imidazole groups occupying the axial positions. The imidazole ring makes a dihedral angle of 81.78 (18)° with the Ni/N/Cl equatorial plane. In the crystal, mol-ecules are linked via N-H⋯Cl hydrogen bonds and C-H⋯π inter-actions, forming a three-dimensional network.Entities:
Year: 2013 PMID: 24046579 PMCID: PMC3772436 DOI: 10.1107/S1600536813016747
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| [NiCl2(C3H4N2)2(NH3)2] | |
| Orthorhombic, | Mo |
| Hall symbol: -P 2ac 2ab | Cell parameters from 1338 reflections |
| θ = 5.2–29.1° | |
| µ = 2.16 mm−1 | |
| Block, green | |
| 0.5 × 0.4 × 0.4 mm |
| Oxford Diffraction Xcalibur Eos diffractometer | 1338 independent reflections |
| Radiation source: fine-focus sealed tube | 1137 reflections with |
| Graphite monochromator | |
| Detector resolution: 15.9821 pixels mm-1 | θmax = 29.1°, θmin = 5.2° |
| ω and φ scan | |
| Absorption correction: multi-scan ( | |
| 4464 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1338 reflections | (Δ/σ)max < 0.001 |
| 71 parameters | Δρmax = 0.76 e Å−3 |
| 0 restraints | Δρmin = −1.00 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger. |
| C4 | 0.1725 (5) | 0.0044 (5) | 0.3343 (3) | 0.0331 (9) | |
| H4 | 0.2329 | −0.0824 | 0.3530 | 0.040* | |
| C6 | 0.0749 (5) | 0.1968 (6) | 0.2518 (3) | 0.0369 (9) | |
| H6 | 0.0539 | 0.2659 | 0.2053 | 0.044* | |
| C7 | 0.0103 (4) | 0.1991 (5) | 0.3298 (2) | 0.0288 (8) | |
| H7 | −0.0643 | 0.2720 | 0.3462 | 0.035* | |
| Cl2 | −0.25211 (9) | −0.00290 (10) | 0.44598 (5) | 0.0227 (2) | |
| N3 | 0.0715 (3) | 0.0774 (4) | 0.38102 (17) | 0.0209 (6) | |
| N5 | 0.1766 (4) | 0.0725 (5) | 0.2555 (2) | 0.0372 (8) | |
| H5 | 0.2338 | 0.0425 | 0.2145 | 0.045* | |
| N8 | −0.0253 (3) | 0.2503 (3) | 0.53954 (16) | 0.0128 (5) | |
| H8A | −0.0989 | 0.2973 | 0.5109 | 0.015* | |
| H8B | 0.0568 | 0.3070 | 0.5292 | 0.015* | |
| H8C | −0.0446 | 0.2530 | 0.5954 | 0.015* | |
| Ni1 | 0.0000 | 0.0000 | 0.5000 | 0.0150 (2) |
| C4 | 0.031 (2) | 0.041 (2) | 0.0275 (19) | 0.0049 (16) | 0.0083 (16) | 0.0018 (15) |
| C6 | 0.040 (2) | 0.050 (2) | 0.0203 (16) | −0.0078 (19) | 0.0006 (16) | 0.0116 (18) |
| C7 | 0.0277 (19) | 0.035 (2) | 0.0233 (17) | 0.0025 (15) | 0.0011 (14) | 0.0094 (15) |
| Cl2 | 0.0183 (4) | 0.0255 (4) | 0.0242 (4) | −0.0017 (3) | −0.0041 (3) | 0.0038 (3) |
| N3 | 0.0209 (14) | 0.0267 (14) | 0.0152 (12) | −0.0010 (11) | 0.0022 (11) | 0.0021 (11) |
| N5 | 0.0391 (19) | 0.052 (2) | 0.0206 (14) | −0.0066 (17) | 0.0140 (14) | −0.0034 (15) |
| N8 | 0.0144 (11) | 0.0118 (10) | 0.0123 (10) | 0.0009 (9) | −0.0010 (9) | −0.0004 (9) |
| Ni1 | 0.0151 (3) | 0.0177 (3) | 0.0123 (3) | 0.00026 (19) | −0.00016 (19) | 0.00066 (19) |
| C4—N3 | 1.312 (5) | N3—Ni1 | 2.063 (3) |
| C4—N5 | 1.345 (5) | N5—H5 | 0.8600 |
| C4—H4 | 0.9300 | N8—Ni1 | 2.095 (2) |
| C6—C7 | 1.353 (6) | N8—H8A | 0.8900 |
| C6—N5 | 1.357 (6) | N8—H8B | 0.8900 |
| C6—H6 | 0.9300 | N8—H8C | 0.8900 |
| C7—N3 | 1.374 (5) | Ni1—N3i | 2.063 (3) |
| C7—H7 | 0.9300 | Ni1—N8i | 2.095 (2) |
| Cl2—Ni1 | 2.4527 (9) | Ni1—Cl2i | 2.4527 (9) |
| N3—C4—N5 | 110.5 (4) | Ni1—N8—H8C | 109.5 |
| N3—C4—H4 | 124.7 | H8A—N8—H8C | 109.5 |
| N5—C4—H4 | 124.7 | H8B—N8—H8C | 109.5 |
| C7—C6—N5 | 105.7 (3) | N3i—Ni1—N3 | 180.0 |
| C7—C6—H6 | 127.1 | N3i—Ni1—N8 | 89.00 (11) |
| N5—C6—H6 | 127.1 | N3—Ni1—N8 | 91.00 (11) |
| C6—C7—N3 | 109.7 (4) | N3i—Ni1—N8i | 91.00 (11) |
| C6—C7—H7 | 125.2 | N3—Ni1—N8i | 89.00 (11) |
| N3—C7—H7 | 125.2 | N8—Ni1—N8i | 180.0 |
| C4—N3—C7 | 105.9 (3) | N3i—Ni1—Cl2i | 89.45 (8) |
| C4—N3—Ni1 | 126.3 (3) | N3—Ni1—Cl2i | 90.55 (8) |
| C7—N3—Ni1 | 127.2 (2) | N8—Ni1—Cl2i | 89.62 (7) |
| C4—N5—C6 | 108.2 (3) | N8i—Ni1—Cl2i | 90.38 (7) |
| C4—N5—H5 | 125.9 | N3i—Ni1—Cl2 | 90.55 (8) |
| C6—N5—H5 | 125.9 | N3—Ni1—Cl2 | 89.45 (8) |
| Ni1—N8—H8A | 109.5 | N8—Ni1—Cl2 | 90.38 (7) |
| Ni1—N8—H8B | 109.5 | N8i—Ni1—Cl2 | 89.62 (7) |
| H8A—N8—H8B | 109.5 | Cl2i—Ni1—Cl2 | 180.0 |
| N5—C6—C7—N3 | −0.1 (5) | C4—N3—Ni1—N8 | 143.9 (3) |
| N5—C4—N3—C7 | −0.9 (5) | C7—N3—Ni1—N8 | −46.1 (3) |
| N5—C4—N3—Ni1 | 170.8 (3) | C4—N3—Ni1—N8i | −36.1 (3) |
| C6—C7—N3—C4 | 0.6 (5) | C7—N3—Ni1—N8i | 133.9 (3) |
| C6—C7—N3—Ni1 | −171.1 (3) | C4—N3—Ni1—Cl2i | 54.3 (3) |
| N3—C4—N5—C6 | 0.9 (5) | C7—N3—Ni1—Cl2i | −135.7 (3) |
| C7—C6—N5—C4 | −0.5 (5) | C4—N3—Ni1—Cl2 | −125.7 (3) |
| C4—N3—Ni1—N3i | 126 (8) | C7—N3—Ni1—Cl2 | 44.3 (3) |
| C7—N3—Ni1—N3i | −64 (8) |
| H··· | ||||
| N5—H5···Cl2ii | 0.86 | 2.53 | 3.268 (3) | 144 |
| N8—H8 | 0.89 | 2.32 | 3.180 (3) | 162 |
| N8—H8 | 0.89 | 2.37 | 3.210 (3) | 157 |
| C4—H4··· | 0.93 | 2.95 | 3.772 (5) | 148 |
Hydrogen-bond geometry (Å, °)
Cg1 is the centroid of the N3/C4/N5/C6/C7 ring.
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N5—H5⋯Cl2i | 0.86 | 2.53 | 3.268 (3) | 144 |
| N8—H8 | 0.89 | 2.32 | 3.180 (3) | 162 |
| N8—H8 | 0.89 | 2.37 | 3.210 (3) | 157 |
| C4—H4⋯ | 0.93 | 2.95 | 3.772 (5) | 148 |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .