Literature DB >> 24045702

Aptamers: multifunctional molecules for biomedical research.

Jayeeta Banerjee1, Marit Nilsen-Hamilton.   

Abstract

Aptamers are single-stranded oligonucleotides that fold into well-defined three-dimensional shapes, allowing them to bind their targets with high affinity and specificity. They can be generated through an in vitro process called "Systemic Evolution of Ligands by Exponential Enrichment" and applied for specific detection, inhibition, and characterization of various targets like small organic and inorganic molecules, proteins, and whole cells. Aptamers have also been called chemical antibodies because of their synthetic origin and their similar modes of action to antibodies. They exhibit significant advantages over antibodies in terms of their small size, synthetic accessibility, and ability to be chemically modified and thus endowed with new properties. The first generation of aptamer drug "Macugen" was available for public use within 25 years of the discovery of aptamers. With others in the pipeline for clinical trials, this emerging field of medical biotechnology is raising significant interest. However, aptamers pose different problems for their development than for antibodies that need to be addressed to achieve practical applications. It is likely that current developments in aptamer engineering will be the basis for the evolution of improved future bioanalytical and biomedical applications. The present review discusses the development of aptamers for therapeutics, drug delivery, target validation and imaging, and reviews some of the challenges to fully realizing the promise of aptamers in biomedical applications.

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Year:  2013        PMID: 24045702     DOI: 10.1007/s00109-013-1085-2

Source DB:  PubMed          Journal:  J Mol Med (Berl)        ISSN: 0946-2716            Impact factor:   4.599


  109 in total

1.  Highly sensitive amplified electronic detection of DNA by biocatalyzed precipitation of an insoluble product onto electrodes.

Authors:  Fernando Patolsky; Amir Lichtenstein; Itamar Willner
Journal:  Chemistry       Date:  2003-03-03       Impact factor: 5.236

2.  Highly modular structure and ligand binding by conformational capture in a minimalistic riboswitch.

Authors:  Elke Duchardt-Ferner; Julia E Weigand; Oliver Ohlenschläger; Sina R Schmidtke; Beatrix Suess; Jens Wöhnert
Journal:  Angew Chem Int Ed Engl       Date:  2010-08-16       Impact factor: 15.336

3.  Simultaneous electrochemical detection of both PSMA (+) and PSMA (-) prostate cancer cells using an RNA/peptide dual-aptamer probe.

Authors:  Kyoungin Min; Kyung-Mi Song; Minseon Cho; Yang-Sook Chun; Yoon-Bo Shim; Ja Kang Ku; Changill Ban
Journal:  Chem Commun (Camb)       Date:  2010-04-21       Impact factor: 6.222

4.  One-step, room temperature, colorimetric detection of mercury (Hg2+) using DNA/nanoparticle conjugates.

Authors:  Xuejia Xue; Feng Wang; Xiaogang Liu
Journal:  J Am Chem Soc       Date:  2008-02-23       Impact factor: 15.419

5.  Cell type-specific delivery of siRNAs with aptamer-siRNA chimeras.

Authors:  James O McNamara; Eran R Andrechek; Yong Wang; Kristi D Viles; Rachel E Rempel; Eli Gilboa; Bruce A Sullenger; Paloma H Giangrande
Journal:  Nat Biotechnol       Date:  2006-06-25       Impact factor: 54.908

6.  The nucleolin targeting aptamer AS1411 destabilizes Bcl-2 messenger RNA in human breast cancer cells.

Authors:  Sridharan Soundararajan; Weiwei Chen; Eleanor K Spicer; Nigel Courtenay-Luck; Daniel J Fernandes
Journal:  Cancer Res       Date:  2008-04-01       Impact factor: 12.701

7.  RNA aptamer blockade of osteopontin inhibits growth and metastasis of MDA-MB231 breast cancer cells.

Authors:  Zhiyong Mi; Hongtao Guo; M Benjamin Russell; Yingmiao Liu; Bruce A Sullenger; Paul C Kuo
Journal:  Mol Ther       Date:  2008-11-04       Impact factor: 11.454

8.  Carbon nanotubes protect DNA strands during cellular delivery.

Authors:  Yanrong Wu; Joseph A Phillips; Haipeng Liu; Ronghua Yang; Weihong Tan
Journal:  ACS Nano       Date:  2008-10-28       Impact factor: 15.881

9.  Multiple conformations of SAM-II riboswitch detected with SAXS and NMR spectroscopy.

Authors:  Bin Chen; Xiaobing Zuo; Yun-Xing Wang; T Kwaku Dayie
Journal:  Nucleic Acids Res       Date:  2011-12-01       Impact factor: 16.971

Review 10.  Coupling Aptamers to Short Interfering RNAs as Therapeutics.

Authors:  Laura Cerchia; Carla Lucia Esposito; Simona Camorani; Silvia Catuogno; Vittorio de Franciscis
Journal:  Pharmaceuticals (Basel)       Date:  2011-10-27
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  27 in total

1.  Retargeting pre-existing human antibodies to a bacterial pathogen with an alpha-Gal conjugated aptamer.

Authors:  Sascha A Kristian; John H Hwang; Bradley Hall; Emma Leire; John Iacomini; Robert Old; Uri Galili; Charles Roberts; Kary B Mullis; Mike Westby; Victor Nizet
Journal:  J Mol Med (Berl)       Date:  2015-05-05       Impact factor: 4.599

2.  Generation of HBsAg DNA aptamer using modified cell-based SELEX strategy.

Authors:  Mina Mirian; Shirin Kouhpayeh; Laleh Shariati; Maryam Boshtam; Ilnaz Rahimmanesh; Leila Darzi; Razieh Taghizadeh; Ali Jahanian-Najafabadi; Hossein Khanahmad
Journal:  Mol Biol Rep       Date:  2021-01-05       Impact factor: 2.316

3.  Molecular mechanisms for dynamic regulation of N1 riboswitch by aminoglycosides.

Authors:  Marta Kulik; Takaharu Mori; Yuji Sugita; Joanna Trylska
Journal:  Nucleic Acids Res       Date:  2018-11-02       Impact factor: 16.971

Review 4.  Recent Advances in Aptamers Targeting Immune System.

Authors:  Piao-Ping Hu
Journal:  Inflammation       Date:  2017-02       Impact factor: 4.092

5.  Self-Assembled Aptamer-Nanomedicine for Targeted Chemotherapy and Gene Therapy.

Authors:  Nianxi Zhao; Zihua Zeng; Youli Zu
Journal:  Small       Date:  2017-12-04       Impact factor: 13.281

6.  AptaBlocks: Designing RNA complexes and accelerating RNA-based drug delivery systems.

Authors:  Yijie Wang; Jan Hoinka; Yong Liang; Tomasz Adamus; Piotr Swiderski; Teresa M Przytycka
Journal:  Nucleic Acids Res       Date:  2018-09-19       Impact factor: 16.971

Review 7.  Applications of aptamers in targeted imaging: state of the art.

Authors:  Casey A Dougherty; Weibo Cai; Hao Hong
Journal:  Curr Top Med Chem       Date:  2015       Impact factor: 3.295

Review 8.  Aptamers in analytics.

Authors:  Muslum Ilgu; Marit Nilsen-Hamilton
Journal:  Analyst       Date:  2016-03-07       Impact factor: 4.616

9.  Selection of High-Affinity RNA Aptamers That Distinguish between Doxycycline and Tetracycline.

Authors:  Zachary J Tickner; Guocai Zhong; Kelly R Sheptack; Michael Farzan
Journal:  Biochemistry       Date:  2020-09-06       Impact factor: 3.162

10.  Construction and Characterization of Recombinant HEK Cell Over Expressing α4 Integrin.

Authors:  Shamsi Naderi Beni; Shirin Kouhpayeh; Zahra Hejazi; Nahid Heidari Hafshejani; Hossein Khanahmad
Journal:  Adv Pharm Bull       Date:  2015-09-19
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