Literature DB >> 24043317

Medical decision support using machine learning for early detection of late-onset neonatal sepsis.

Subramani Mani1, Asli Ozdas, Constantin Aliferis, Huseyin Atakan Varol, Qingxia Chen, Randy Carnevale, Yukun Chen, Joann Romano-Keeler, Hui Nian, Jörn-Hendrik Weitkamp.   

Abstract

OBJECTIVE: The objective was to develop non-invasive predictive models for late-onset neonatal sepsis from off-the-shelf medical data and electronic medical records (EMR).
DESIGN: The data used in this study are from 299 infants admitted to the neonatal intensive care unit in the Monroe Carell Jr. Children's Hospital at Vanderbilt and evaluated for late-onset sepsis. Gold standard diagnostic labels (sepsis negative, culture positive sepsis, culture negative/clinical sepsis) were assigned based on all the laboratory, clinical and microbiology data available in EMR. Only data that were available up to 12 h after phlebotomy for blood culture testing were used to build predictive models using machine learning (ML) algorithms. MEASUREMENT: We compared sensitivity, specificity, positive predictive value and negative predictive value of sepsis treatment of physicians with the predictions of models generated by ML algorithms.
RESULTS: The treatment sensitivity of all the nine ML algorithms and specificity of eight out of the nine ML algorithms tested exceeded that of the physician when culture-negative sepsis was included. When culture-negative sepsis was excluded both sensitivity and specificity exceeded that of the physician for all the ML algorithms. The top three predictive variables were the hematocrit or packed cell volume, chorioamnionitis and respiratory rate.
CONCLUSIONS: Predictive models developed from off-the-shelf and EMR data using ML algorithms exceeded the treatment sensitivity and treatment specificity of clinicians. A prospective study is warranted to assess the clinical utility of the ML algorithms in improving the accuracy of antibiotic use in the management of neonatal sepsis.

Entities:  

Keywords:  Decision Support; Early Detection; Electronic Medical Records; Machine Learning; Neonatal Sepsis; Predictive Models

Mesh:

Substances:

Year:  2013        PMID: 24043317      PMCID: PMC3932458          DOI: 10.1136/amiajnl-2013-001854

Source DB:  PubMed          Journal:  J Am Med Inform Assoc        ISSN: 1067-5027            Impact factor:   4.497


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Review 1.  Decision trees: an overview and their use in medicine.

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Journal:  J Med Syst       Date:  2002-10       Impact factor: 4.460

2.  HITON: a novel Markov Blanket algorithm for optimal variable selection.

Authors:  C F Aliferis; I Tsamardinos; A Statnikov
Journal:  AMIA Annu Symp Proc       Date:  2003

3.  Frequency, natural course, and outcome of neonatal neutropenia.

Authors:  A Funke; R Berner; B Traichel; D Schmeisser; J U Leititis; C M Niemeyer
Journal:  Pediatrics       Date:  2000-07       Impact factor: 7.124

4.  Use of neural networks in predicting the risk of coronary artery disease.

Authors:  P Lapuerta; S P Azen; L LaBree
Journal:  Comput Biomed Res       Date:  1995-02

5.  Patterns of use of antibiotics in two newborn nurseries.

Authors:  M R Hammerschlag; J O Klein; M Herschel; F C Chen; R Fermin
Journal:  N Engl J Med       Date:  1977-06-02       Impact factor: 91.245

6.  Toward the early diagnosis of neonatal sepsis and sepsis-like illness using novel heart rate analysis.

Authors:  M P Griffin; J R Moorman
Journal:  Pediatrics       Date:  2001-01       Impact factor: 7.124

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Authors:  Arinder Malik; Charles P S Hui; Ross A Pennie; Haresh Kirpalani
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8.  Changes in pathogens causing early-onset sepsis in very-low-birth-weight infants.

Authors:  Barbara J Stoll; Nellie Hansen; Avroy A Fanaroff; Linda L Wright; Waldemar A Carlo; Richard A Ehrenkranz; James A Lemons; Edward F Donovan; Ann R Stark; Jon E Tyson; William Oh; Charles R Bauer; Sheldon B Korones; Seetha Shankaran; Abbot R Laptook; David K Stevenson; Lu-Ann Papile; W Kenneth Poole
Journal:  N Engl J Med       Date:  2002-07-25       Impact factor: 91.245

9.  Computer-aided diagnosis of acute abdominal pain.

Authors:  F T de Dombal; D J Leaper; J R Staniland; A P McCann; J C Horrocks
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10.  Clinical outcomes following institution of universal leukoreduction of blood transfusions for premature infants.

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Journal:  JAMA       Date:  2003-04-16       Impact factor: 56.272

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Review 6.  Emerging Technologies for Molecular Diagnosis of Sepsis.

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Journal:  Clin Microbiol Rev       Date:  2018-02-28       Impact factor: 26.132

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