Literature DB >> 24041501

Acceleration of the depolymerization of amyloid β fibrils by ultrasonication.

Hisashi Yagi1, Kyohei Hasegawa, Yuichi Yoshimura, Yuji Goto.   

Abstract

Amyloid fibrils, rigid and filamentous aggregates associated with various diseases, are often difficult to depolymerize into monomers. Ultrasonication is a strong agitation that accelerates nucleation above the critical concentration of amyloid fibrillation. We examined the effects of ultrasonication on the fibrils of amyloid β(1-40) as well as on monomers. Ultrasonic pulses accelerated spontaneous fibrillation when the peptide concentration was above 1μM. On the other hand, ultrasonic pulses accelerated the depolymerization of fibrils into monomers at 1μM. These results indicate that, although amyloid fibrillation is a reversible process determined by thermodynamic stability, kinetically trapped supersaturation and physical difficulty of dissolving rigid fibrils prevent the smooth phase transitions. We propose that, in addition to accelerating the nucleation of fibrillation and fragmentation of fibrils above the critical concentration, ultrasonication is useful for dissolving fibrils below the critical concentration.
© 2013.

Entities:  

Keywords:  Amyloid fibril; Amyloid β; Aβ(1–40); CD; Solubility; Supersaturation; TEM; ThT; Ultrasonication; amyloid β peptide composed of 40 residues; circular dichroism; thioflavin T; transmission electron microscopy

Mesh:

Substances:

Year:  2013        PMID: 24041501     DOI: 10.1016/j.bbapap.2013.08.013

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  8 in total

Review 1.  Impact of membrane curvature on amyloid aggregation.

Authors:  Mayu S Terakawa; Yuxi Lin; Misaki Kinoshita; Shingo Kanemura; Dai Itoh; Toshihiko Sugiki; Masaki Okumura; Ayyalusamy Ramamoorthy; Young-Ho Lee
Journal:  Biochim Biophys Acta Biomembr       Date:  2018-04-28       Impact factor: 3.747

2.  Supersaturation-limited amyloid fibrillation of insulin revealed by ultrasonication.

Authors:  Hiroya Muta; Young-Ho Lee; József Kardos; Yuxi Lin; Hisashi Yagi; Yuji Goto
Journal:  J Biol Chem       Date:  2014-05-20       Impact factor: 5.157

3.  A residue-specific shift in stability and amyloidogenicity of antibody variable domains.

Authors:  Cardine N Nokwe; Martin Zacharias; Hisashi Yagi; Manuel Hora; Bernd Reif; Yuji Goto; Johannes Buchner
Journal:  J Biol Chem       Date:  2014-08-05       Impact factor: 5.157

4.  Nonequilibrium all-atom molecular dynamics simulation of the bubble cavitation and application to dissociate amyloid fibrils.

Authors:  Man Hoang Viet; Philippe Derreumaux; Phuong H Nguyen
Journal:  J Chem Phys       Date:  2016-11-07       Impact factor: 3.488

5.  Small liposomes accelerate the fibrillation of amyloid β (1-40).

Authors:  Mayu S Terakawa; Hisashi Yagi; Masayuki Adachi; Young-Ho Lee; Yuji Goto
Journal:  J Biol Chem       Date:  2014-11-18       Impact factor: 5.157

6.  Supersaturation-limited and Unlimited Phase Transitions Compete to Produce the Pathway Complexity in Amyloid Fibrillation.

Authors:  Masayuki Adachi; Masatomo So; Kazumasa Sakurai; József Kardos; Yuji Goto
Journal:  J Biol Chem       Date:  2015-06-10       Impact factor: 5.157

Review 7.  Amyloid Oligomers: A Joint Experimental/Computational Perspective on Alzheimer's Disease, Parkinson's Disease, Type II Diabetes, and Amyotrophic Lateral Sclerosis.

Authors:  Phuong H Nguyen; Ayyalusamy Ramamoorthy; Bikash R Sahoo; Jie Zheng; Peter Faller; John E Straub; Laura Dominguez; Joan-Emma Shea; Nikolay V Dokholyan; Alfonso De Simone; Buyong Ma; Ruth Nussinov; Saeed Najafi; Son Tung Ngo; Antoine Loquet; Mara Chiricotto; Pritam Ganguly; James McCarty; Mai Suan Li; Carol Hall; Yiming Wang; Yifat Miller; Simone Melchionna; Birgit Habenstein; Stepan Timr; Jiaxing Chen; Brianna Hnath; Birgit Strodel; Rakez Kayed; Sylvain Lesné; Guanghong Wei; Fabio Sterpone; Andrew J Doig; Philippe Derreumaux
Journal:  Chem Rev       Date:  2021-02-05       Impact factor: 60.622

8.  Nucleus factory on cavitation bubble for amyloid β fibril.

Authors:  Kichitaro Nakajima; Hirotsugu Ogi; Kanta Adachi; Kentaro Noi; Masahiko Hirao; Hisashi Yagi; Yuji Goto
Journal:  Sci Rep       Date:  2016-02-25       Impact factor: 4.379

  8 in total

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