Literature DB >> 24034255

Decoding information in cell shape.

Padmini Rangamani1, Azi Lipshtat, Evren U Azeloglu, Rhodora Cristina Calizo, Mufeng Hu, Saba Ghassemi, James Hone, Suzanne Scarlata, Susana R Neves, Ravi Iyengar.   

Abstract

Shape is an indicator of cell health. But how is the information in shape decoded? We hypothesize that decoding occurs by modulation of signaling through changes in plasma membrane curvature. Using analytical approaches and numerical simulations, we studied how elongation of cell shape affects plasma membrane signaling. Mathematical analyses reveal transient accumulation of activated receptors at regions of higher curvature with increasing cell eccentricity. This distribution of activated receptors is periodic, following the Mathieu function, and it arises from local imbalance between reaction and diffusion of soluble ligands and receptors in the plane of the membrane. Numerical simulations show that transient microdomains of activated receptors amplify signals to downstream protein kinases. For growth factor receptor pathways, increasing cell eccentricity elevates the levels of activated cytoplasmic Src and nuclear MAPK1,2. These predictions were experimentally validated by changing cellular eccentricity, showing that shape is a locus of retrievable information storage in cells.
Copyright © 2013 Elsevier Inc. All rights reserved.

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Year:  2013        PMID: 24034255      PMCID: PMC3874130          DOI: 10.1016/j.cell.2013.08.026

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  39 in total

1.  Computational modeling of the dynamics of the MAP kinase cascade activated by surface and internalized EGF receptors.

Authors:  Birgit Schoeberl; Claudia Eichler-Jonsson; Ernst Dieter Gilles; Gertraud Müller
Journal:  Nat Biotechnol       Date:  2002-04       Impact factor: 54.908

Review 2.  The Virtual Cell: a software environment for computational cell biology.

Authors:  L M Loew; J C Schaff
Journal:  Trends Biotechnol       Date:  2001-10       Impact factor: 19.536

3.  Nanometer analysis of cell spreading on matrix-coated surfaces reveals two distinct cell states and STEPs.

Authors:  Benjamin J Dubin-Thaler; Gregory Giannone; Hans-Günther Döbereiner; Michael P Sheetz
Journal:  Biophys J       Date:  2004-03       Impact factor: 4.033

4.  Dynamic phase transitions in cell spreading.

Authors:  Hans-Günther Döbereiner; Benjamin Dubin-Thaler; Grégory Giannone; Harry S Xenias; Michael P Sheetz
Journal:  Phys Rev Lett       Date:  2004-09-02       Impact factor: 9.161

Review 5.  Membrane curvature and mechanisms of dynamic cell membrane remodelling.

Authors:  Harvey T McMahon; Jennifer L Gallop
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

6.  Dynamics of the Ras/ERK MAPK cascade as monitored by fluorescent probes.

Authors:  Aki Fujioka; Kenta Terai; Reina E Itoh; Kazuhiro Aoki; Takeshi Nakamura; Shinya Kuroda; Eisuke Nishida; Michiyuki Matsuda
Journal:  J Biol Chem       Date:  2006-01-17       Impact factor: 5.157

7.  Emergent properties of networks of biological signaling pathways.

Authors:  U S Bhalla; R Iyengar
Journal:  Science       Date:  1999-01-15       Impact factor: 47.728

8.  Role of cell shape in growth control.

Authors:  J Folkman; A Moscona
Journal:  Nature       Date:  1978-06-01       Impact factor: 49.962

Review 9.  Rho GTPases and the control of cell behaviour.

Authors:  A Hall
Journal:  Biochem Soc Trans       Date:  2005-11       Impact factor: 5.407

10.  Association of p60c-src with endosomal membranes in mammalian fibroblasts.

Authors:  K B Kaplan; J R Swedlow; H E Varmus; D O Morgan
Journal:  J Cell Biol       Date:  1992-07       Impact factor: 10.539

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  67 in total

1.  Periodicity of nuclear morphology in human fibroblasts.

Authors:  Laura Seaman; Walter Meixner; John Snyder; Indika Rajapakse
Journal:  Nucleus       Date:  2015       Impact factor: 4.197

2.  Geometry-induced protein pattern formation.

Authors:  Dominik Thalmeier; Jacob Halatek; Erwin Frey
Journal:  Proc Natl Acad Sci U S A       Date:  2016-01-06       Impact factor: 11.205

3.  Transient junction anisotropies orient annular cell polarization in the Drosophila airway tubes.

Authors:  Chie Hosono; Ryo Matsuda; Boris Adryan; Christos Samakovlis
Journal:  Nat Cell Biol       Date:  2015-11-09       Impact factor: 28.824

4.  Spherical nanoparticle supported lipid bilayers for the structural study of membrane geometry-sensitive molecules.

Authors:  Riqiang Fu; Richard L Gill; Edward Y Kim; Nicole E Briley; Erin R Tyndall; Jie Xu; Conggang Li; Kumaran S Ramamurthi; John M Flanagan; Fang Tian
Journal:  J Am Chem Soc       Date:  2015-10-28       Impact factor: 15.419

5.  Mechanical constraints imposed by 3D cellular geometry and arrangement modulate growth patterns in the Arabidopsis embryo.

Authors:  George W Bassel; Petra Stamm; Gabriella Mosca; Pierre Barbier de Reuille; Daniel J Gibbs; Robin Winter; Ales Janka; Michael J Holdsworth; Richard S Smith
Journal:  Proc Natl Acad Sci U S A       Date:  2014-05-27       Impact factor: 11.205

6.  Electrophoretic cytometry of adherent cells.

Authors:  Elaine J Su; Amy E Herr
Journal:  Lab Chip       Date:  2017-12-05       Impact factor: 6.799

Review 7.  Regulation of bifunctional proteins in cells: Lessons from the phospholipase Cβ/G protein pathway.

Authors:  Lela Jackson; Androniqi Qifti; Katherine M Pearce; Suzanne Scarlata
Journal:  Protein Sci       Date:  2019-12-31       Impact factor: 6.725

8.  Analysis of Cellular Feature Differences of Astrocytomas with Distinct Mutational Profiles Using Digitized Histopathology Images.

Authors:  Mousumi Roy; Fusheng Wang; George Teodoro; Jose Velazqeuz Vega; Daniel Brat; Jun Kong
Journal:  Annu Int Conf IEEE Eng Med Biol Soc       Date:  2018-07

Review 9.  Systems biology of cellular membranes: a convergence with biophysics.

Authors:  Morgan Chabanon; Jeanne C Stachowiak; Padmini Rangamani
Journal:  Wiley Interdiscip Rev Syst Biol Med       Date:  2017-05-05

Review 10.  Concise Review: Organ Engineering: Design, Technology, and Integration.

Authors:  Gaurav Kaushik; Jeroen Leijten; Ali Khademhosseini
Journal:  Stem Cells       Date:  2016-10-25       Impact factor: 6.277

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