| Literature DB >> 24031965 |
Kang Zhou1, Meng Gui, Pinglan Li, Shaohua Xing, Tingting Cui, Zhaohui Peng.
Abstract
Vibrio harveyi is considered as a causative agent of the systemic disease, vibriosis, which occurs in many biological fields. The effects of temperatures (12.9-27.1 °C) and water activity (NaCl% 0.6%-3.4%) on V. harveyi were investigated. The behavior and growth characteristics of V. harveyi was studied and modeled. Growth curves were fitted by using Gompertz and Baranyi models, and the Baranyi model showed a better fittness. Then, the maximum growth rates (μmax) and lag phase durations (LPD, λ) obtained from both Gompertz and Baranyi model were modeled as a combination function of temperature and water activity using the response surface and Arrhenius-Davey models for secondary model. The value of r(2), MSE, bias and accuracy factor suggest Baranyi model has better fitness than Gompertz model. Furthermore, validation of the developed models with independent data from ComBase also shown better interrelationship between observed and predicted growth parameter when using Baranyi model.Entities:
Keywords: Vibrio harveyi; modelling; temperature; water activity
Year: 2012 PMID: 24031965 PMCID: PMC3769047 DOI: 10.1590/S1517-838220120004000018
Source DB: PubMed Journal: Braz J Microbiol ISSN: 1517-8382 Impact factor: 2.476
Figure 1The observed and Gompertz model predicted growth of Vibrio harveyi in different conditions (a), (b); the observed and Baranyi model predicted growth of Vibrio harveyi in different conditions (c), (d). (Scatter dots are observed; curves are predicted). (◇), 12.9 °C, 2%; (﹡), 15°C, 1%; (●), 15 °C, 3%; (◆), 20 °C, 0.6%; (■), 20 °C, 2%; (▲), 20 °C, 3.4%; (×), 25 °C, 1%; (△), 25 °C, 3%; (○), 27.1 °C, 2%.
Figure 2Surface plots of the growth rates predicted by RS model as a function temperature and NaCl% for (a); and surface plots of the growth rates predicted by AD model as a function temperature and NaCl% for (b). The symbols represent the observed data.. Surface plots of the lag phase duration predicted by RS model as a function temperature and NaCl% for (a); and surface plots of the lag phase duration predicted by AD model as a function temperature and NaCl% for (b). The symbols represent the observed data.
Figure 3Surface plots of the lag phase duration predicted by RS model as a function temperature and NaCl% for (a); and surface plots of the lag phase duration predicted by AD model as a function temperature and Nacl% for (b). The symbols represent the observed data.
Evaluation of specific models predicting Vibrio harveyi in different combinations according to various mathematical/statistical characteristics
| Temperature (°C), NaCl (%) | Models | |
|---|---|---|
| Gompertz | Baranyi | |
| 27.1 °C, 2% | ||
| r2 | 0.9937 | 0.9964 |
| MSE | 0.0446 | 0.0260 |
| Bias | 0.9983 | 0.9884 |
| Accuracy | 1.0663 | 1.0278 |
| 25 °C, 1% | ||
| r2 | 0.9899 | 0.9924 |
| MSE | 0.1780 | 0.0613 |
| Bias | 0.9405 | 0.9856 |
| Accuracy | 1.0711 | 1.0517 |
| 25 °C, 3% | ||
| r2 | 0.9965 | 0.9952 |
| MSE | 0.0247 | 0.0524 |
| Bias | 0.9984 | 0.9901 |
| Accuracy | 1.0358 | 1.1698 |
| 20 °C, 0.6% | ||
| r2 | 0.9985 | 0.9954 |
| MSE | 0.0112 | 0.0637 |
| Bias | 0.9994 | 0.9818 |
| Accuracy | 1.0264 | 1.0429 |
| 20 °C, 2% | ||
| r2 | 0.9982 | 0.9987 |
| MSE | 0.0252 | 0.0372 |
| Bias | 0.9955 | 0.9961 |
| Accuracy | 1.0672 | 1.1198 |
| 20 °C, 3.4% | ||
| r2 | 0.9991 | 0.9964 |
| MSE | 0.0043 | 0.0424 |
| Bias | 0.9988 | 0.9914 |
| Accuracy | 1.0163 | 1.0391 |
| 15 °C, 1% | ||
| r2 | 0.9969 | 0.9981 |
| MSE | 0.0321 | 0.0416 |
| Bias | 0.9971 | 0.9784 |
| Accuracy | 1.0744 | 1.0411 |
| 15 °C, 3% | ||
| r2 | 0.9971 | 0.9982 |
| MSE | 0.0358 | 0.0295 |
| Bias | 0.9987 | 0.9890 |
| Accuracy | 1.0604 | 1.0391 |
| 12.9 °C, 2% | ||
| r2 | 0.9800 | 0.9980 |
| MSE | 0.0644 | 0.0633 |
| Bias | 0.9994 | 0.9959 |
| Accuracy | 1.0252 | 1.0281 |
Coefficients of growth rate models, describing the combined effects of temperature and NaCl% on V. harveyi.
| Gompertz-RS | Baranyi-RS | Gompertz-AD | Baranyi-AD | |
|---|---|---|---|---|
| C0 | 0.0453 | -0.6522 | 0.8369 | 5.0662 |
| C1 | -0.0041 | 0.0269 | -22.1187 | -120.1110 |
| C2 | -0.0489 | 0.2468 | -0.0758 | -0.6390 |
| C3 | -0.0002 | -0.0250 | 0.0587 | 7.8723 |
| C4 | 0.0004 | 0.0024 | 161.4295 | 711.4668 |
| C5 | 0.0130 | 0.0472 | 0.0180 | 0.0417 |
| r2 | 0.8703 | 0.9616 | 0.8956 | 0.9413 |
| MSE | 0.0046 | 0.0013 | 0.0036 | 0.0014 |
| Bias | 1.0405 | 1.0121 | 1.0053 | 1.0000 |
| Accuracy | 1.2906 | 1.1770 | 1.1539 | 1.1991 |
Validation indices for the performance of the models on independently derived data from Combase.
| RS | AD | ||
|---|---|---|---|
| Gompertz | MSE | 0.0201 | 0.0191 |
| Bias | 1.9367 | 1.8883 | |
| Accuracy | 1.9985 | 1.9590 | |
| Baranyi | MSE | 0.0152 | 0.0162 |
| Bias | 0.8919 | 0.9473 | |
| Accuracy | 1.5636 | 1.5980 |
Coefficient and mathematical/statistical indices used to validate the lag phase duration models, describing the combined effects of temperature and NaCl% on V. harveyi.
| Function | r2 | MSE | bias | accuracy | |
|---|---|---|---|---|---|
| Response surface | LP=83.424-5.518×-T-0.189×NaCl-0.003×T×NaCl+0.093×T2+0.070×NaCl2 | 0.9971 | 0.0420 | 0.9543 | 1.1249 |
| Arrhenius-Davey | LP=-21.417+623.428/T-0.549×NaCl+0.997/T×NaCl+264.433/T2+0.133×NaCl2 | 0.9990 | 0.0146 | 0.9768 | 1.1768 |
Figure 4Compare the growth of V. harveyi in broth to 4 models. (▲, RS model; ×, AD model)