Literature DB >> 24013588

Rank-based variable selection with censored data.

Jinfeng Xu1, Chenlei Leng, Zhiliang Ying.   

Abstract

A rank-based variable selection procedure is developed for the semiparametric accelerated failure time model with censored observations where the penalized likelihood (partial likelihood) method is not directly applicable. The new method penalizes the rank-based Gehan-type loss function with the ℓ1 penalty. To correctly choose the tuning parameters, a novel likelihood-based χ2-type criterion is proposed. Desirable properties of the estimator such as the oracle properties are established through the local quadratic expansion of the Gehan loss function. In particular, our method can be easily implemented by the standard linear programming packages and hence numerically convenient. Extensions to marginal models for multivariate failure time are also considered. The performance of the new procedure is assessed through extensive simulation studies and illustrated with two real examples.

Entities:  

Keywords:  Accelerated failure time model; Adaptive Lasso; BIC; Gehan-type loss function; Lasso; Variable selection

Year:  2010        PMID: 24013588      PMCID: PMC3762511          DOI: 10.1007/s11222-009-9126-y

Source DB:  PubMed          Journal:  Stat Comput        ISSN: 0960-3174            Impact factor:   2.559


  6 in total

1.  A GENERALIZED WILCOXON TEST FOR COMPARING ARBITRARILY SINGLY-CENSORED SAMPLES.

Authors:  E A GEHAN
Journal:  Biometrika       Date:  1965-06       Impact factor: 2.445

2.  Penalized Estimating Functions and Variable Selection in Semiparametric Regression Models.

Authors:  Brent A Johnson; D Y Lin; Donglin Zeng
Journal:  J Am Stat Assoc       Date:  2008-06-01       Impact factor: 5.033

3.  Variable selection for proportional odds model.

Authors:  Wenbin Lu; Hao H Zhang
Journal:  Stat Med       Date:  2007-09-10       Impact factor: 2.373

4.  Tuning parameter selectors for the smoothly clipped absolute deviation method.

Authors:  Hansheng Wang; Runze Li; Chih-Ling Tsai
Journal:  Biometrika       Date:  2007-08-01       Impact factor: 2.445

5.  The lasso method for variable selection in the Cox model.

Authors:  R Tibshirani
Journal:  Stat Med       Date:  1997-02-28       Impact factor: 2.373

6.  Regularized estimation for the accelerated failure time model.

Authors:  T Cai; J Huang; L Tian
Journal:  Biometrics       Date:  2009-06       Impact factor: 2.571

  6 in total
  3 in total

1.  Semiparametric Accelerated Failure Time Partial Linear Model and Its Application to Breast Cancer.

Authors:  Yubo Zou; Jiajia Zhang; Guoyou Qin
Journal:  Comput Stat Data Anal       Date:  2011-03-01       Impact factor: 1.681

2.  A Tutorial on Rank-based Coefficient Estimation for Censored Data in Small- and Large-Scale Problems.

Authors:  Matthias Chung; Qi Long; Brent A Johnson
Journal:  Stat Comput       Date:  2013-09-01       Impact factor: 2.559

Review 3.  A selective review of robust variable selection with applications in bioinformatics.

Authors:  Cen Wu; Shuangge Ma
Journal:  Brief Bioinform       Date:  2014-12-05       Impact factor: 13.994

  3 in total

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