Literature DB >> 24013386

Population genetics of Mediterranean and Saharan olives: geographic patterns of differentiation and evidence for early generations of admixture.

G Besnard1, A El Bakkali, H Haouane, D Baali-Cherif, A Moukhli, B Khadari.   

Abstract

BACKGROUND AND AIMS: The olive (Olea europaea subsp. europaea) was domesticated in the Mediterranean area but its wild relatives are distributed over three continents, from the Mediterranean basin to South Africa and south-western Asia. Recent studies suggested that this crop originated in the Levant while a secondary diversification occurred in most westward areas. A possible contribution of the Saharan subspecies (subsp. laperrinei) has been highlighted, but the data available were too limited to draw definite conclusions. Here, patterns of genetic differentiation in the Mediterranean and Saharan olives are analysed to test for recent admixture between these taxa.
METHODS: Nuclear microsatellite and plastid DNA (ptDNA) data were compiled from previous studies and completed for a sample of 470 cultivars, 390 wild Mediterranean trees and 270 Saharan olives. A network was reconstructed for the ptDNA haplotypes, while a Bayesian clustering method was applied to identify the main gene pools in the data set and then simulate and test for early generations of admixture between Mediterranean and Saharan olives. KEY
RESULTS: Four lineages of ptDNA haplotypes are recognized: three from the Mediterranean basin and one from the Sahara. Only one haplotype, primarily distributed in the Sahara, is shared between laperrinei and europaea. This haplotype is detected once in 'Dhokar', a cultivar from the Maghreb. Nuclear microsatellites show geographic patterns of genetic differentiation in the Mediterranean olive that reflect the primary origins of cultivars in the Levant, and indicate a high genetic differentiation between europaea and laperrinei. No first-generation hybrid between europaea and laperrinei is detected, but recent, reciprocal admixture between Mediterranean and Saharan subspecies is found in a few accessions, including 'Dhokar'.
CONCLUSIONS: This study reports for the first time admixture between Mediterranean and Saharan olives. Although its contribution remains limited, Laperrine's olive has been involved in the diversification of cultivated olives.

Entities:  

Keywords:  Admixture; Laperrine's olive; Mediterranean basin; Olea europaea; Sahara; domestication; microsatellite; population genetic simulations; secondary diversification; wild genetic resources

Mesh:

Substances:

Year:  2013        PMID: 24013386      PMCID: PMC3806528          DOI: 10.1093/aob/mct196

Source DB:  PubMed          Journal:  Ann Bot        ISSN: 0305-7364            Impact factor:   4.357


  34 in total

1.  Inference of population structure using multilocus genotype data.

Authors:  J K Pritchard; M Stephens; P Donnelly
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

2.  CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure.

Authors:  Mattias Jakobsson; Noah A Rosenberg
Journal:  Bioinformatics       Date:  2007-05-07       Impact factor: 6.937

Review 3.  From forest to field: perennial fruit crop domestication.

Authors:  Allison J Miller; Briana L Gross
Journal:  Am J Bot       Date:  2011-08-24       Impact factor: 3.844

4.  The complex history of the olive tree: from Late Quaternary diversification of Mediterranean lineages to primary domestication in the northern Levant.

Authors:  G Besnard; B Khadari; M Navascués; M Fernández-Mazuecos; A El Bakkali; N Arrigo; D Baali-Cherif; V Brunini-Bronzini de Caraffa; S Santoni; P Vargas; V Savolainen
Journal:  Proc Biol Sci       Date:  2013-02-06       Impact factor: 5.349

5.  Genetic diversity and relationships in olive ( Olea europaea L.) germplasm collections as determined by randomly amplified polymorphic DNA.

Authors:  A. Belaj; Z. Satovic; L. Rallo; I. Trujillo
Journal:  Theor Appl Genet       Date:  2002-06-19       Impact factor: 5.699

6.  Identification of microsatellite loci in olive (Olea europaea) and their characaterization in Italian and Iberian olive trees.

Authors:  K M Sefc; M S Lopes; D Mendonça; M R Dos Santos; M L Da Câmara Machado; A Da Câmara Machado
Journal:  Mol Ecol       Date:  2000-08       Impact factor: 6.185

Review 7.  Primary domestication and early uses of the emblematic olive tree: palaeobotanical, historical and molecular evidence from the Middle East.

Authors:  David Kaniewski; Elise Van Campo; Tom Boiy; Jean-Frédéric Terral; Bouchaïb Khadari; Guillaume Besnard
Journal:  Biol Rev Camb Philos Soc       Date:  2012-04-18

8.  Genomic diversity and introgression in O. sativa reveal the impact of domestication and breeding on the rice genome.

Authors:  Keyan Zhao; Mark Wright; Jennifer Kimball; Georgia Eizenga; Anna McClung; Michael Kovach; Wricha Tyagi; Md Liakat Ali; Chih-Wei Tung; Andy Reynolds; Carlos D Bustamante; Susan R McCouch
Journal:  PLoS One       Date:  2010-05-24       Impact factor: 3.240

9.  Evolutionary history of almond tree domestication in the Mediterranean basin.

Authors:  M Delplancke; N Alvarez; L Benoit; A Espíndola; H I Joly; S Neuenschwander; N Arrigo
Journal:  Mol Ecol       Date:  2012-11-27       Impact factor: 6.185

10.  New insight into the history of domesticated apple: secondary contribution of the European wild apple to the genome of cultivated varieties.

Authors:  Amandine Cornille; Pierre Gladieux; Marinus J M Smulders; Isabel Roldán-Ruiz; François Laurens; Bruno Le Cam; Anush Nersesyan; Joanne Clavel; Marina Olonova; Laurence Feugey; Ivan Gabrielyan; Xiu-Guo Zhang; Maud I Tenaillon; Tatiana Giraud
Journal:  PLoS Genet       Date:  2012-05-10       Impact factor: 5.917

View more
  20 in total

Review 1.  On the origins and domestication of the olive: a review and perspectives.

Authors:  Guillaume Besnard; Jean-Frédéric Terral; Amandine Cornille
Journal:  Ann Bot       Date:  2018-03-05       Impact factor: 4.357

2.  The eastern part of the Fertile Crescent concealed an unexpected route of olive (Olea europaea L.) differentiation.

Authors:  Soraya Mousavi; Roberto Mariotti; Francesca Bagnoli; Lorenzo Costantini; Nicolò G M Cultrera; Kazem Arzani; Saverio Pandolfi; Giovanni Giuseppe Vendramin; Bahareh Torkzaban; Mehdi Hosseini-Mazinani; Luciana Baldoni
Journal:  Ann Bot       Date:  2017-06-01       Impact factor: 4.357

3.  Pollen-mediated gene flow and fine-scale spatial genetic structure in Olea europaea subsp. europaea var. sylvestris.

Authors:  D Beghè; A Piotti; Z Satovic; R de la Rosa; A Belaj
Journal:  Ann Bot       Date:  2017-03-01       Impact factor: 4.357

Review 4.  The Status of Genetic Resources and Olive Breeding in Tunisia.

Authors:  Olfa Saddoud Debbabi; Fathi Ben Amar; Sameh Mnasri Rahmani; Francesca Taranto; Cinzia Montemurro; Monica Marilena Miazzi
Journal:  Plants (Basel)       Date:  2022-07-01

5.  In the name of the rose: a roadmap for rose research in the genome era.

Authors:  Marinus J M Smulders; Paul Arens; Peter M Bourke; Thomas Debener; Marcus Linde; Jan De Riek; Leen Leus; Tom Ruttink; Sylvie Baudino; Laurence Hibrant Saint-Oyant; Jeremy Clotault; Fabrice Foucher
Journal:  Hortic Res       Date:  2019-05-03       Impact factor: 6.793

Review 6.  Recent developments in olive (Olea europaea L.) genetics and genomics: applications in taxonomy, varietal identification, traceability and breeding.

Authors:  L Sebastiani; M Busconi
Journal:  Plant Cell Rep       Date:  2017-04-22       Impact factor: 4.570

7.  Contrasting Genetic Footprints among Saharan Olive Populations: Potential Causes and Conservation Implications.

Authors:  Guillaume Besnard; Océane Gorrilliot; Pauline Raimondeau; Benoit Génot; Ahmed El Bakkali; Fabien Anthelme; Djamel Baali-Cherif
Journal:  Plants (Basel)       Date:  2021-06-14

8.  Monumental olive trees of Cyprus contributed to the establishment of the contemporary olive germplasm.

Authors:  Katerina Anestiadou; Nikolaos Nikoloudakis; Marianna Hagidimitriou; Andreas Katsiotis
Journal:  PLoS One       Date:  2017-11-07       Impact factor: 3.240

9.  EST-SNP Study of Olea europaea L. Uncovers Functional Polymorphisms between Cultivated and Wild Olives.

Authors:  Roberto Mariotti; Angjelina Belaj; Raul De La Rosa; Lorenzo Leòn; Federico Brizioli; Luciana Baldoni; Soraya Mousavi
Journal:  Genes (Basel)       Date:  2020-08-10       Impact factor: 4.096

10.  Advances in genotyping microsatellite markers through sequencing and consequences of scoring methods for Ceratonia siliqua (Leguminosae).

Authors:  Juan Viruel; Anne Haguenauer; Marianick Juin; Fatma Mirleau; Delphine Bouteiller; Magda Boudagher-Kharrat; Lahcen Ouahmane; Stefano La Malfa; Frédéric Médail; Hervé Sanguin; Gonzalo Nieto Feliner; Alex Baumel
Journal:  Appl Plant Sci       Date:  2018-12-11       Impact factor: 1.936

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.