Literature DB >> 24012540

Activity and bacterial diversity of snow around Russian Antarctic stations.

Anna Lopatina1, Vjacheslav Krylenkov, Konstantin Severinov.   

Abstract

The diversity and temporal dynamics of bacterial communities in pristine snow around two Russian Antarctic stations was investigated. Taxonomic analysis of rDNA libraries revealed that snow communities were dominated by bacteria from a small number of operational taxonomic units (OTUs) that underwent dramatic swings in abundance between the 54th (2008-2009) and 55th (2009-2010) Russian Antarctic expeditions. Moreover, analysis of the 55th expedition samples indicated that there was very little, if any, correspondence in abundance of clones belonging to the same OTU present in rDNA and rRNA libraries. The latter result suggests that most rDNA clones originate from bacteria that are not alive and/or active and may have been deposited on the snow surface from the atmosphere. In contrast, clones most abundant in rRNA libraries (mostly belonging to Variovorax, Janthinobacterium, Pseudomonas, and Sphingomonas genera) may be considered as endogenous Antarctic snow inhabitants.
Copyright © 2013 Institut Pasteur. Published by Elsevier Masson SAS. All rights reserved.

Keywords:  16S rDNA; Antarctica; Bacterial diversity; Psychrophiles; Snow

Mesh:

Substances:

Year:  2013        PMID: 24012540     DOI: 10.1016/j.resmic.2013.08.005

Source DB:  PubMed          Journal:  Res Microbiol        ISSN: 0923-2508            Impact factor:   3.992


  10 in total

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Authors:  Graciéle C A de Menezes; Valéria M Godinho; Bárbara A Porto; Vívian N Gonçalves; Luiz H Rosa
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2.  Host-Associated Phages Disperse across the Extraterrestrial Analogue Antarctica.

Authors:  Janina Rahlff; Till L V Bornemann; Anna Lopatina; Konstantin Severinov; Alexander J Probst
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Journal:  Appl Environ Microbiol       Date:  2018-03-19       Impact factor: 4.792

4.  Bacterial diversity in snow on North Pole ice floes.

Authors:  Aviaja L Hauptmann; Marek Stibal; Jacob Bælum; Thomas Sicheritz-Pontén; Søren Brunak; Jeff S Bowman; Lars H Hansen; Carsten S Jacobsen; Nikolaj Blom
Journal:  Extremophiles       Date:  2014-06-21       Impact factor: 2.395

5.  Potential drivers of microbial community structure and function in Arctic spring snow.

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Journal:  Front Microbiol       Date:  2014-08-07       Impact factor: 5.640

6.  Sources and selection of snow-specific microbial communities in a Greenlandic sea ice snow cover.

Authors:  Lorrie Maccario; Shelly D Carpenter; Jody W Deming; Timothy M Vogel; Catherine Larose
Journal:  Sci Rep       Date:  2019-02-19       Impact factor: 4.379

7.  Isolation and characterization of fast-growing green snow bacteria from coastal East Antarctica.

Authors:  Margarita Smirnova; Uladzislau Miamin; Achim Kohler; Leonid Valentovich; Artur Akhremchuk; Anastasiya Sidarenka; Andrey Dolgikh; Volha Shapaval
Journal:  Microbiologyopen       Date:  2020-12-29       Impact factor: 3.904

8.  Spatial and Annual Variation in Microbial Abundance, Community Composition, and Diversity Associated With Alpine Surface Snow.

Authors:  Lucas Fillinger; Kerstin Hürkamp; Christine Stumpp; Nina Weber; Dominik Forster; Bela Hausmann; Lotta Schultz; Christian Griebler
Journal:  Front Microbiol       Date:  2021-11-29       Impact factor: 5.640

9.  Snow surface microbiome on the High Antarctic Plateau (DOME C).

Authors:  Luigi Michaud; Angelina Lo Giudice; Mohamed Mysara; Pieter Monsieurs; Carmela Raffa; Natalie Leys; Stefano Amalfitano; Rob Van Houdt
Journal:  PLoS One       Date:  2014-08-07       Impact factor: 3.240

10.  Metagenomic Analysis of Bacterial Communities of Antarctic Surface Snow.

Authors:  Anna Lopatina; Sofia Medvedeva; Sergey Shmakov; Maria D Logacheva; Vjacheslav Krylenkov; Konstantin Severinov
Journal:  Front Microbiol       Date:  2016-03-31       Impact factor: 5.640

  10 in total

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