Literature DB >> 23997568

Default Prior Distributions and Efficient Posterior Computation in Bayesian Factor Analysis.

Joyee Ghosh1, David B Dunson.   

Abstract

Factor analytic models are widely used in social sciences. These models have also proven useful for sparse modeling of the covariance structure in multidimensional data. Normal prior distributions for factor loadings and inverse gamma prior distributions for residual variances are a popular choice because of their conditionally conjugate form. However, such prior distributions require elicitation of many hyperparameters and tend to result in poorly behaved Gibbs samplers. In addition, one must choose an informative specification, as high variance prior distributions face problems due to impropriety of the posterior distribution. This article proposes a default, heavy-tailed prior distribution specification, which is induced through parameter expansion while facilitating efficient posterior computation. We also develop an approach to allow uncertainty in the number of factors. The methods are illustrated through simulated examples and epidemiology and toxicology applications. Data sets and computer code used in this article are available online.

Entities:  

Keywords:  Bayes factor; Covariance structure; Latent variables; Parameter expansion; Selection of factors; Slow mixing

Year:  2009        PMID: 23997568      PMCID: PMC3755784          DOI: 10.1198/jcgs.2009.07145

Source DB:  PubMed          Journal:  J Comput Graph Stat        ISSN: 1061-8600            Impact factor:   2.302


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