Literature DB >> 23994288

Of ion pumps, sensors and channels - perspectives on microbial rhodopsins between science and history.

Mathias Grote1, Martin Engelhard2, Peter Hegemann3.   

Abstract

We present a historical overview of research on microbial rhodopsins ranging from the 1960s to the present date. Bacteriorhodopsin (BR), the first identified microbial rhodopsin, was discovered in the context of cell and membrane biology and shown to be an outward directed proton transporter. In the 1970s, BR had a big impact on membrane structural research and bioenergetics, that made it to a model for membrane proteins and established it as a probe for the introduction of various biophysical techniques that are widely used today. Halorhodopsin (HR), which supports BR physiologically by transporting negatively charged Cl⁻ into the cell, is researched within the microbial rhodopsin community since the late 1970s. A few years earlier, the observation of phototactic responses in halobacteria initiated research on what are known today as sensory rhodopsins (SR). The discovery of the light-driven ion channel, channelrhodopsin (ChR), serving as photoreceptors for behavioral responses in green alga has complemented inquiries into this photoreceptor family. Comparing the discovery stories, we show that these followed quite different patterns, albeit the objects of research being very similar. The stories of microbial rhodopsins present a comprehensive perspective on what can nowadays be considered one of nature's paradigms for interactions between organisms and light. Moreover, they illustrate the unfolding of this paradigm within the broader conceptual and instrumental framework of the molecular life sciences. This article is part of a Special Issue entitled: Retinal Proteins - You can teach an old dog new tricks.
© 2013 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Bacteriorhodopsin; Channelrhodopsin; History; Membrane research; Sensory rhodopsin

Mesh:

Substances:

Year:  2013        PMID: 23994288     DOI: 10.1016/j.bbabio.2013.08.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  27 in total

1.  Crystal structure of a light-driven sodium pump.

Authors:  Ivan Gushchin; Vitaly Shevchenko; Vitaly Polovinkin; Kirill Kovalev; Alexey Alekseev; Ekaterina Round; Valentin Borshchevskiy; Taras Balandin; Alexander Popov; Thomas Gensch; Christoph Fahlke; Christian Bamann; Dieter Willbold; Georg Büldt; Ernst Bamberg; Valentin Gordeliy
Journal:  Nat Struct Mol Biol       Date:  2015-04-06       Impact factor: 15.369

2.  History and Perspectives of Ion-Transporting Rhodopsins.

Authors:  Hideki Kandori
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

3.  Optogenetic control of mitochondrial metabolism and Ca2+ signaling by mitochondria-targeted opsins.

Authors:  Tatiana Tkatch; Elisa Greotti; Gytis Baranauskas; Diana Pendin; Soumitra Roy; Luliaoana I Nita; Jennifer Wettmarshausen; Matthias Prigge; Ofer Yizhar; Orian S Shirihai; Daniel Fishman; Michal Hershfinkel; Ilya A Fleidervish; Fabiana Perocchi; Tullio Pozzan; Israel Sekler
Journal:  Proc Natl Acad Sci U S A       Date:  2017-06-13       Impact factor: 11.205

Review 4.  Some factors affecting the process of photoinduced hydroxylaminolysis in different bacteriorhodopsin-based media.

Authors:  Anna B Druzhko; Tatyana V Dyukova; Sergey K Pirutin
Journal:  Eur Biophys J       Date:  2017-05-04       Impact factor: 1.733

5.  Spectroscopic study of the transmembrane domain of a rhodopsin-phosphodiesterase fusion protein from a unicellular eukaryote.

Authors:  Masahito Watari; Tatsuya Ikuta; Daichi Yamada; Wataru Shihoya; Kazuho Yoshida; Satoshi P Tsunoda; Osamu Nureki; Hideki Kandori
Journal:  J Biol Chem       Date:  2019-01-08       Impact factor: 5.157

Review 6.  Following Optogenetic Dimerizers and Quantitative Prospects.

Authors:  Jacqueline Niu; Manu Ben Johny; Ivy E Dick; Takanari Inoue
Journal:  Biophys J       Date:  2016-08-17       Impact factor: 4.033

7.  X-ray Crystallographic Structure of Thermophilic Rhodopsin: IMPLICATIONS FOR HIGH THERMAL STABILITY AND OPTOGENETIC FUNCTION.

Authors:  Takashi Tsukamoto; Kenji Mizutani; Taisuke Hasegawa; Megumi Takahashi; Naoya Honda; Naoki Hashimoto; Kazumi Shimono; Keitaro Yamashita; Masaki Yamamoto; Seiji Miyauchi; Shin Takagi; Shigehiko Hayashi; Takeshi Murata; Yuki Sudo
Journal:  J Biol Chem       Date:  2016-04-18       Impact factor: 5.157

8.  A far-red cyanobacteriochrome lineage specific for verdins.

Authors:  Marcus V Moreno; Nathan C Rockwell; Manuel Mora; Andrew J Fisher; J Clark Lagarias
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-26       Impact factor: 11.205

9.  The evolution of eyes: major steps. The Keeler lecture 2017: centenary of Keeler Ltd.

Authors:  I R Schwab
Journal:  Eye (Lond)       Date:  2017-10-20       Impact factor: 3.775

Review 10.  Conversion of microbial rhodopsins: insights into functionally essential elements and rational protein engineering.

Authors:  Akimasa Kaneko; Keiichi Inoue; Keiichi Kojima; Hideki Kandori; Yuki Sudo
Journal:  Biophys Rev       Date:  2017-11-25
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.