Literature DB >> 23991633

In-situ generation of differential sensors that fingerprint kinases and the cellular response to their expression.

Diana Zamora-Olivares1, Tamer S Kaoud, Kevin N Dalby, Eric V Anslyn.   

Abstract

Mitogen-activated protein (MAP) kinases are responsible for many cellular functions, and their malfunction manifests itself in several human diseases. Usually, monitoring the phosphorylation states of MAP kinases in vitro requires the preparation and purification of the proteins or Western blotting. Herein, we report an array sensing approach for the differentiation of MAP kinases and their phosphorylated counterparts in vitro. This technique utilizes a library of differential receptors created in situ containing peptides known for affinity to MAP kinases, and a Zn(II)-dipicolylamine complex that binds phosphate groups on proteins. An indicator-displacement assay signals the binding of the individual receptors to the kinases, while chemometrics is used to create a fingerprint for the kinases and their state of activity. For example, linear discriminant analysis correctly identified kinase activity with a classification accuracy of 97.5% in vitro, while the cellular response to kinase expression was classified with 100% accuracy.

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Year:  2013        PMID: 23991633      PMCID: PMC3846390          DOI: 10.1021/ja407397z

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  39 in total

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Review 9.  Mitogen-activated protein kinase pathways mediated by ERK, JNK, and p38 protein kinases.

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  11 in total

1.  Quantification of ERK Kinase Activity in Biological Samples Using Differential Sensing.

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Review 5.  Array-based "Chemical Nose" Sensing in Diagnostics and Drug Discovery.

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7.  A Multi-Fluorescent DNA/Graphene Oxide Conjugate Sensor for Signature-Based Protein Discrimination.

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8.  Label-Free Fluorescent Kinase and Phosphatase Enzyme Assays with Supramolecular Host-Dye Pairs.

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Review 9.  Art, auto-mechanics, and supramolecular chemistry. A merging of hobbies and career.

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10.  A polyion complex sensor array for markerless and noninvasive identification of differentiated mesenchymal stem cells from human adipose tissue.

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