Literature DB >> 23989162

Crystallization of the HigBA2 toxin-antitoxin complex from Vibrio cholerae.

San Hadži1, Abel Garcia-Pino, Sergio Martinez-Rodriguez, Koen Verschueren, Mikkel Christensen-Dalsgaard, Kenn Gerdes, Jurij Lah, Remy Loris.   

Abstract

The genome of Vibrio cholerae encodes two higBA toxin-antitoxin (TA) modules that are activated by amino-acid starvation. Here, the TA complex of the second module, higBA2, as well as the C-terminal domain of the corresponding HigA2 antitoxin, have been purified and crystallized. The HigBA2 complex crystallized in two crystal forms. Crystals of form I belonged to space group P2(1)2(1)2, with unit-cell parameters a = 129.0, b = 119.8, c = 33.4 Å, and diffracted to 3.0 Å resolution. The asymmetric unit is likely to contain a single complex consisting of two toxin monomers and one antitoxin dimer. The second crystal form crystallized in space group P3(2)21, with unit-cell parameters a = 134.5, c = 55.4 Å. These crystals diffracted to 2.2 Å resolution and probably contain a complex with a different stoichiometry. Crystals of the C-terminal domain of HigA2 belonged to space group C2, with unit-cell parameters a = 115.4, b = 61.2, c = 73.8 Å, β = 106.7°, and diffracted to 1.8 Å resolution.

Entities:  

Keywords:  intrinsic disorder; macromolecular complexes; persistence; ribonucleases; toxin–antitoxin modules

Mesh:

Substances:

Year:  2013        PMID: 23989162      PMCID: PMC3758162          DOI: 10.1107/S1744309113021490

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  55 in total

1.  The solution structure of ParD, the antidote of the ParDE toxin antitoxin module, provides the structural basis for DNA and toxin binding.

Authors:  Monika Oberer; Klaus Zangger; Karl Gruber; Walter Keller
Journal:  Protein Sci       Date:  2007-08       Impact factor: 6.725

2.  HicA of Escherichia coli defines a novel family of translation-independent mRNA interferases in bacteria and archaea.

Authors:  Mikkel G Jørgensen; Deo P Pandey; Milena Jaskolska; Kenn Gerdes
Journal:  J Bacteriol       Date:  2008-12-05       Impact factor: 3.490

3.  Structural mechanism of transcriptional autorepression of the Escherichia coli RelB/RelE antitoxin/toxin module.

Authors:  Guang-Yao Li; Yonglong Zhang; Masayori Inouye; Mitsuhiko Ikura
Journal:  J Mol Biol       Date:  2008-04-22       Impact factor: 5.469

4.  Characterization of a higBA toxin-antitoxin locus in Vibrio cholerae.

Authors:  Priya Prakash Budde; Brigid M Davis; Jie Yuan; Matthew K Waldor
Journal:  J Bacteriol       Date:  2006-11-03       Impact factor: 3.490

5.  Inhibitory mechanism of Escherichia coli RelE-RelB toxin-antitoxin module involves a helix displacement near an mRNA interferase active site.

Authors:  Guang-Yao Li; Yonglong Zhang; Masayori Inouye; Mitsuhiko Ikura
Journal:  J Biol Chem       Date:  2009-03-18       Impact factor: 5.157

6.  Comprehensive comparative-genomic analysis of type 2 toxin-antitoxin systems and related mobile stress response systems in prokaryotes.

Authors:  Kira S Makarova; Yuri I Wolf; Eugene V Koonin
Journal:  Biol Direct       Date:  2009-06-03       Impact factor: 4.540

7.  Bacterial toxin HigB associates with ribosomes and mediates translation-dependent mRNA cleavage at A-rich sites.

Authors:  Jennifer M Hurley; Nancy A Woychik
Journal:  J Biol Chem       Date:  2009-05-07       Impact factor: 5.157

8.  Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB.

Authors:  Maria A Schumacher; Kevin M Piro; Weijun Xu; Sonja Hansen; Kim Lewis; Richard G Brennan
Journal:  Science       Date:  2009-01-16       Impact factor: 47.728

9.  Doc of prophage P1 is inhibited by its antitoxin partner Phd through fold complementation.

Authors:  Abel Garcia-Pino; Mikkel Christensen-Dalsgaard; Lode Wyns; Michael Yarmolinsky; Roy David Magnuson; Kenn Gerdes; Remy Loris
Journal:  J Biol Chem       Date:  2008-08-30       Impact factor: 5.157

10.  K2D2: estimation of protein secondary structure from circular dichroism spectra.

Authors:  Carolina Perez-Iratxeta; Miguel A Andrade-Navarro
Journal:  BMC Struct Biol       Date:  2008-05-13
View more
  3 in total

1.  Crystallization of two operator complexes from the Vibrio cholerae HigBA2 toxin-antitoxin module.

Authors:  San Hadzi; Abel Garcia-Pino; Kenn Gerdes; Jurij Lah; Remy Loris
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-01-28       Impact factor: 1.056

2.  Ribosome-dependent Vibrio cholerae mRNAse HigB2 is regulated by a β-strand sliding mechanism.

Authors:  San Hadži; Abel Garcia-Pino; Sarah Haesaerts; Dukas Jurenas; Kenn Gerdes; Jurij Lah; Remy Loris
Journal:  Nucleic Acids Res       Date:  2017-05-05       Impact factor: 16.971

Review 3.  Keeping the Wolves at Bay: Antitoxins of Prokaryotic Type II Toxin-Antitoxin Systems.

Authors:  Wai Ting Chan; Manuel Espinosa; Chew Chieng Yeo
Journal:  Front Mol Biosci       Date:  2016-03-22
  3 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.