Literature DB >> 23989158

Expression, crystallization and preliminary X-ray crystallographic analysis of alcohol dehydrogenase (ADH) from Kangiella koreensis.

Ho-Phuong-Thuy Ngo1, Seung-Hye Hong, Myoung-Ki Hong, Tan-Viet Pham, Deok-Kun Oh, Lin-Woo Kang.   

Abstract

Alcohol dehydrogenases (ADHs) are a group of dehydrogenase enzymes that facilitate the interconversion between alcohols and aldehydes or ketones with the reduction of NAD(+) to NADH. In bacteria, some alcohol dehydrogenases catalyze the opposite reaction as part of fermentation to ensure a constant supply of NAD(+). The adh gene from Kangiella koreensis was cloned and the protein (KkADH) was expressed, purified and crystallized. A KkADH crystal diffracted to 2.5 Å resolution and belonged to the monoclinic space group P2(1), with unit-cell parameters a = 94.1, b = 80.9, c = 115.6 Å, β = 111.9°. Four monomers were present in the asymmetric unit, with a corresponding VM of 2.55 Å(3) Da(-1) and a solvent content of 51.8%.

Entities:  

Keywords:  ADH; Kangiella koreensis; alcohol dehydrogenase

Mesh:

Substances:

Year:  2013        PMID: 23989158      PMCID: PMC3758158          DOI: 10.1107/S1744309113022008

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  9 in total

1.  Molecular replacement with MOLREP.

Authors:  Alexei Vagin; Alexei Teplyakov
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-12-21

2.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

3.  Characteristics of alcohol dehydrogenases of certain aerobic bacteria representing human colonic flora.

Authors:  T Nosova; H Jousimies-Somer; P Kaihovaara; K Jokelainen; R Heine; M Salaspuro
Journal:  Alcohol Clin Exp Res       Date:  1997-05       Impact factor: 3.455

4.  Structural and enzymatic properties of a gastric NADP(H)- dependent and retinal-active alcohol dehydrogenase.

Authors:  J M Peralba; E Cederlund; B Crosas; A Moreno; P Julià; S E Martínez; B Persson; J Farr s; X Parés; H Jörnvall
Journal:  J Biol Chem       Date:  1999-09-10       Impact factor: 5.157

5.  NADP-dependent alcohol dehydrogenases in bacteria and yeast: purification and partial characterization of the enzymes from Acinetobacter calcoaceticus and Saccharomyces cerevisiae.

Authors:  M R Wales; C A Fewson
Journal:  Microbiology       Date:  1994-01       Impact factor: 2.777

6.  Complete genome sequence of Kangiella koreensis type strain (SW-125).

Authors:  Cliff Han; Johannes Sikorski; Alla Lapidus; Matt Nolan; Tijana Glavina Del Rio; Hope Tice; Jan-Fang Cheng; Susan Lucas; Feng Chen; Alex Copeland; Natalia Ivanova; Konstantinos Mavromatis; Galina Ovchinnikova; Amrita Pati; David Bruce; Lynne Goodwin; Sam Pitluck; Amy Chen; Krishna Palaniappan; Miriam Land; Loren Hauser; Yun-Juan Chang; Cynthia D Jeffries; Patrick Chain; Elizabeth Saunders; Thomas Brettin; Markus Göker; Brian J Tindall; Jim Bristow; Jonathan A Eisen; Victor Markowitz; Philip Hugenholtz; Nikos C Kyrpides; Hans-Peter Klenk; John C Detter
Journal:  Stand Genomic Sci       Date:  2009-11-22

7.  REFMAC5 for the refinement of macromolecular crystal structures.

Authors:  Garib N Murshudov; Pavol Skubák; Andrey A Lebedev; Navraj S Pannu; Roberto A Steiner; Robert A Nicholls; Martyn D Winn; Fei Long; Alexei A Vagin
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18

8.  Vascular bioactivation of nitroglycerin by aldehyde dehydrogenase-2: reaction intermediates revealed by crystallography and mass spectrometry.

Authors:  Barbara S Lang; Antonius C F Gorren; Gustav Oberdorfer; M Verena Wenzl; Cristina M Furdui; Leslie B Poole; Bernd Mayer; Karl Gruber
Journal:  J Biol Chem       Date:  2012-09-17       Impact factor: 5.157

9.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.