Literature DB >> 23989149

Crystallization and preliminary X-ray crystallographic analysis of the amylomaltase from Corynebacterium glutamicum.

Wiraya Srisimarat1, Shuichiro Murakami, Piamsook Pongsawasdi, Kuakarun Krusong.   

Abstract

Amylomaltase (AM; EC 2.4.1.25) belongs to the 4-α-glucanotransferase group of the α-amylase family. The enzyme can produce cycloamylose or large-ring cyclodextrin through intramolecular transglycosylation or cyclization reactions of α-1,4-glucan. Amylomaltase from the mesophilic bacterium Corynebacterium glutamicum (CgAM) contains extra residues at the N-terminus for which the three-dimensional structure is not yet known. In this study, CgAM was overexpressed and purified to homogeneity using DEAE FF and Phenyl FF columns. The purified CgAM was crystallized by the vapour-diffusion method. Preliminary X-ray data showed that the CgAM crystal diffracted to 1.7 Å resolution and belonged to space group P2(1)2(1)2(1), with unit-cell parameters a = 73.28, b = 82.61, c = 118.64 Å. To obtain the initial phases, crystals of selenomethionyl-substituted amylomaltase were produced, and multiple-wavelength anomalous dispersion phasing and structure refinement are now in progress.

Entities:  

Keywords:  Corynebacterium glutamicum; amylomaltase

Mesh:

Substances:

Year:  2013        PMID: 23989149      PMCID: PMC3758149          DOI: 10.1107/S1744309113020319

Source DB:  PubMed          Journal:  Acta Crystallogr Sect F Struct Biol Cryst Commun        ISSN: 1744-3091


  21 in total

1.  Three-way stabilization of the covalent intermediate in amylomaltase, an alpha-amylase-like transglycosylase.

Authors:  Thomas R M Barends; Jelle B Bultema; Thijs Kaper; Marc J E C van der Maarel; Lubbert Dijkhuizen; Bauke W Dijkstra
Journal:  J Biol Chem       Date:  2007-04-09       Impact factor: 5.157

2.  Solvent content of protein crystals.

Authors:  B W Matthews
Journal:  J Mol Biol       Date:  1968-04-28       Impact factor: 5.469

3.  Structural and functional analysis of substrate recognition by the 250s loop in amylomaltase from Thermus brockianus.

Authors:  Jong-Hyun Jung; Tae-Yang Jung; Dong-Ho Seo; Sei-Mee Yoon; Hyun-Chang Choi; Byoung Chul Park; Cheon-Seok Park; Eui-Jeon Woo
Journal:  Proteins       Date:  2011-02

4.  Crystal structure of amylomaltase from thermus aquaticus, a glycosyltransferase catalysing the production of large cyclic glucans.

Authors:  I Przylas; K Tomoo; Y Terada; T Takaha; K Fujii; W Saenger; N Sträter
Journal:  J Mol Biol       Date:  2000-02-25       Impact factor: 5.469

5.  Characterization of d-Enzyme (4-alpha-Glucanotransferase) in Arabidopsis Leaf.

Authors:  T P Lin; J Preiss
Journal:  Plant Physiol       Date:  1988-01       Impact factor: 8.340

6.  X-ray structure of acarbose bound to amylomaltase from Thermus aquaticus. Implications for the synthesis of large cyclic glucans.

Authors:  I Przylas; Y Terada; K Fujii; T Takaha; W Saenger; N Sträter
Journal:  Eur J Biochem       Date:  2000-12

7.  Thermus aquaticus ATCC 33923 amylomaltase gene cloning and expression and enzyme characterization: production of cycloamylose.

Authors:  Y Terada; K Fujii; T Takaha; S Okada
Journal:  Appl Environ Microbiol       Date:  1999-03       Impact factor: 4.792

8.  Crystal structure of Thermotoga maritima 4-alpha-glucanotransferase and its acarbose complex: implications for substrate specificity and catalysis.

Authors:  Anna Roujeinikova; Carsten Raasch; Svetlana Sedelnikova; Wolfgang Liebl; David W Rice
Journal:  J Mol Biol       Date:  2002-08-02       Impact factor: 5.469

9.  Altered large-ring cyclodextrin product profile due to a mutation at Tyr-172 in the amylomaltase of Corynebacterium glutamicum.

Authors:  Wiraya Srisimarat; Jarunee Kaulpiboon; Kuakarun Krusong; Wolfgang Zimmermann; Piamsook Pongsawasdi
Journal:  Appl Environ Microbiol       Date:  2012-08-03       Impact factor: 4.792

10.  Overview of the CCP4 suite and current developments.

Authors:  Martyn D Winn; Charles C Ballard; Kevin D Cowtan; Eleanor J Dodson; Paul Emsley; Phil R Evans; Ronan M Keegan; Eugene B Krissinel; Andrew G W Leslie; Airlie McCoy; Stuart J McNicholas; Garib N Murshudov; Navraj S Pannu; Elizabeth A Potterton; Harold R Powell; Randy J Read; Alexei Vagin; Keith S Wilson
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2011-03-18
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  3 in total

Review 1.  Remarkable evolutionary relatedness among the enzymes and proteins from the α-amylase family.

Authors:  Štefan Janeček; Marek Gabriško
Journal:  Cell Mol Life Sci       Date:  2016-05-06       Impact factor: 9.261

2.  Identification of an Amylomaltase from the Halophilic Archaeon Haloquadratum walsbyi by Functional Metagenomics: Structural and Functional Insights.

Authors:  Claudia Leoni; Caterina Manzari; Hai Tran; Peter N Golyshin; Graziano Pesole; Mariateresa Volpicella; Luigi R Ceci
Journal:  Life (Basel)       Date:  2022-01-07

Review 3.  Amylomaltases in Extremophilic Microorganisms.

Authors:  Claudia Leoni; Bruno A R Gattulli; Graziano Pesole; Luigi R Ceci; Mariateresa Volpicella
Journal:  Biomolecules       Date:  2021-09-09
  3 in total

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