Literature DB >> 23970083

Genetic diversity studies and identification of SSR markers associated with Fusarium wilt (Fusarium udum) resistance in cultivated pigeonpea (Cajanus cajan).

A K Singh1, V P Rai, R Chand, R P Singh, M N Singh.   

Abstract

Genetic diversity and identification of simple sequence repeat markers correlated with Fusarium wilt resistance was performed in a set of 36 elite cultivated pigeonpea genotypes differing in levels of resistance to Fusarium wilt. Twenty-four polymorphic sequence repeat markers were screened across these genotypes, and amplified a total of 59 alleles with an average high polymorphic information content value of 0.52. Cluster analysis, done by UPGMA and PCA, grouped the 36 pigeonpea genotypes into two main clusters according to their Fusarium wilt reaction. Based on the Kruskal-Wallis ANOVA and simple regression analysis, six simple sequence repeat markers were found to be significantly associated with Fusarium wilt resistance. The phenotypic variation explained by these markers ranged from 23.7 to 56.4%. The present study helps in finding out feasibility of prescreened SSR markers to be used in genetic diversity analysis and their potential association with disease resistance.

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Year:  2013        PMID： 23970083     DOI： 10.1007/s12041-013-0266-7

Source DB:  PubMed          Journal:  J Genet        ISSN： 0022-1333            Impact factor:   1.166


  8 in total

1.  Draft genome sequence of pigeonpea (Cajanus cajan), an orphan legume crop of resource-poor farmers.

Authors:  Rajeev K Varshney; Wenbin Chen; Yupeng Li; Arvind K Bharti; Rachit K Saxena; Jessica A Schlueter; Mark T A Donoghue; Sarwar Azam; Guangyi Fan; Adam M Whaley; Andrew D Farmer; Jaime Sheridan; Aiko Iwata; Reetu Tuteja; R Varma Penmetsa; Wei Wu; Hari D Upadhyaya; Shiaw-Pyng Yang; Trushar Shah; K B Saxena; Todd Michael; W Richard McCombie; Bicheng Yang; Gengyun Zhang; Huanming Yang; Jun Wang; Charles Spillane; Douglas R Cook; Gregory D May; Xun Xu; Scott A Jackson
Journal:  Nat Biotechnol       Date:  2011-11-06       Impact factor: 54.908

Review 2.  Advances in cereal genomics and applications in crop breeding.

Authors:  Rajeev K Varshney; David A Hoisington; Akhilesh K Tyagi
Journal:  Trends Biotechnol       Date:  2006-09-07       Impact factor: 19.536

3.  Low level of genetic diversity in cultivated Pigeonpea compared to its wild relatives is revealed by diversity arrays technology.

Authors:  Shiying Yang; Wen Pang; Gavin Ash; John Harper; Jason Carling; Peter Wenzl; Eric Huttner; Xuxiao Zong; Andrzej Kilian
Journal:  Theor Appl Genet       Date:  2006-07-15       Impact factor: 5.699

4.  Phylogenetic relationships of the pigeonpea (Cajanus cajan) based on nuclear restriction fragment length polymorphisms.

Authors:  R G Nadimpalli; R L Jarret; S C Phatak; G Kochert
Journal:  Genome       Date:  1993-04       Impact factor: 2.166

5.  An intra-specific consensus genetic map of pigeonpea [Cajanus cajan (L.) Millspaugh] derived from six mapping populations.

Authors:  Abhishek Bohra; Rachit K Saxena; B N Gnanesh; Kulbhushan Saxena; M Byregowda; Abhishek Rathore; P B Kavikishor; Douglas R Cook; Rajeev K Varshney
Journal:  Theor Appl Genet       Date:  2012-07-08       Impact factor: 5.699

6.  Development of genic-SSR markers by deep transcriptome sequencing in pigeonpea [Cajanus cajan (L.) Millspaugh].

Authors:  Sutapa Dutta; Giriraj Kumawat; Bikram P Singh; Deepak K Gupta; Sangeeta Singh; Vivek Dogra; Kishor Gaikwad; Tilak R Sharma; Ranjeet S Raje; Tapas K Bandhopadhya; Subhojit Datta; Mahendra N Singh; Fakrudin Bashasab; Pawan Kulwal; K B Wanjari; Rajeev K Varshney; Douglas R Cook; Nagendra K Singh
Journal:  BMC Plant Biol       Date:  2011-01-20       Impact factor: 4.215

7.  Single feature polymorphisms (SFPs) for drought tolerance in pigeonpea (Cajanus spp.).

Authors:  Rachit K Saxena; Xinping Cui; Vivek Thakur; Barbara Walter; Timothy J Close; Rajeev K Varshney
Journal:  Funct Integr Genomics       Date:  2011-05-06       Impact factor: 3.410

8.  New microsatellite markers for pigeonpea (cajanus cajan (L.) millsp.).

Authors:  D A Odeny; B Jayashree; C Gebhardt; J Crouch
Journal:  BMC Res Notes       Date:  2009-03-06
  8 in total
  8 in total

1.  Validation of QTLs for plant ideotype, earliness and growth habit traits in pigeonpea (Cajanus cajan Millsp.).

Authors:  Prakash G Patil; Abhishek Bohra; Naik S J Satheesh; Jyotirmay Dubey; Praveen Pandey; Dibendu Dutta; Farindra Singh; I P Singh; N P Singh
Journal:  Physiol Mol Biol Plants       Date:  2018-09-04

2.  Association mapping to discover significant marker-trait associations for resistance against fusarium wilt variant 2 in pigeonpea [Cajanus cajan (L.) Millspaugh] using SSR markers.

Authors:  Prakash G Patil; Jyotirmay Dubey; Abhishek Bohra; R K Mishra; P R Saabale; Alok Das; Meenal Rathore; N P Singh
Journal:  J Appl Genet       Date:  2017-06-03       Impact factor: 3.240

3.  Construction of genotyping-by-sequencing based high-density genetic maps and QTL mapping for fusarium wilt resistance in pigeonpea.

Authors:  Rachit K Saxena; Vikas K Singh; Sandip M Kale; Revathi Tathineni; Swathi Parupalli; Vinay Kumar; Vanika Garg; Roma R Das; Mamta Sharma; K N Yamini; S Muniswamy; Anuradha Ghanta; Abhishek Rathore; C V Sameer Kumar; K B Saxena; P B Kavi Kishor; Rajeev K Varshney
Journal:  Sci Rep       Date:  2017-05-15       Impact factor: 4.379

4.  New Hypervariable SSR Markers for Diversity Analysis, Hybrid Purity Testing and Trait Mapping in Pigeonpea [Cajanus cajan (L.) Millspaugh].

Authors:  Abhishek Bohra; Rintu Jha; Gaurav Pandey; Prakash G Patil; Rachit K Saxena; Indra P Singh; D Singh; R K Mishra; Ankita Mishra; F Singh; Rajeev K Varshney; N P Singh
Journal:  Front Plant Sci       Date:  2017-03-31       Impact factor: 5.753

5.  The functional analysis of ABCG transporters in the adaptation of pigeon pea (Cajanus cajan) to abiotic stresses.

Authors:  Lili Niu; Hanghang Li; Zhihua Song; Biying Dong; Hongyan Cao; Tengyue Liu; Tingting Du; Wanlong Yang; Rohul Amin; Litao Wang; Qing Yang; Dong Meng; Yujie Fu
Journal:  PeerJ       Date:  2021-01-19       Impact factor: 2.984

6.  Analysis of Genetic Diversity and Population Structure of Pigeonpea [Cajanus cajan (L.) Millsp] Accessions Using SSR Markers.

Authors:  Didas Kimaro; Rob Melis; Julia Sibiya; Hussein Shimelis; Admire Shayanowako
Journal:  Plants (Basel)       Date:  2020-11-25

7.  Genetics of Fusarium Wilt Resistance in Pigeonpea (Cajanus cajan) and Efficacy of Associated SSR Markers.

Authors:  Deepu Singh; B Sinha; V P Rai; M N Singh; D K Singh; R Kumar; A K Singh
Journal:  Plant Pathol J       Date:  2016-04-01       Impact factor: 1.795

8.  Genetic Diversity Studies and Identification of Molecular and Biochemical Markers Associated with Fusarium Wilt Resistance in Cultivated Faba Bean (Vicia faba).

Authors:  Amer F Mahmoud; Bahaa E S Abd El-Fatah
Journal:  Plant Pathol J       Date:  2020-02-01       Impact factor: 1.795
  8 in total

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