Literature DB >> 23964773

DNA as a molecular wire: distance and sequence dependence.

Chris H Wohlgamuth1, Marc A McWilliams, Jason D Slinker.   

Abstract

Functional nanowires and nanoelectronics are sought for their use in next generation integrated circuits, but several challenges limit the use of most nanoscale devices on large scales. DNA has great potential for use as a molecular wire due to high yield synthesis, near-unity purification, and nanoscale self-organization. Nonetheless, a thorough understanding of ground state DNA charge transport (CT) in electronic configurations under biologically relevant conditions, where the fully base-paired, double-helical structure is preserved, is lacking. Here, we explore the fundamentals of CT through double-stranded DNA monolayers on gold by assessing 17 base pair bridges at discrete points with a redox active probe conjugated to a modified thymine. This assessment is performed under temperature-controlled and biologically relevant conditions with cyclic and square wave voltammetry, and redox peaks are analyzed to assess transfer rate and yield. We demonstrate that the yield of transport is strongly tied to the stability of the duplex, linearly correlating with the melting temperature. Transfer rate is found to be temperature-activated and to follow an inverse distance dependence, consistent with a hopping mechanism of transport. These results establish the governing factors of charge transfer speed and throughput in DNA molecular wires for device configurations, guiding subsequent application for nanoscale electronics.

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Year:  2013        PMID: 23964773     DOI: 10.1021/ac401229q

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  12 in total

1.  Application of Electrochemical Devices to Characterize the Dynamic Actions of Helicases on DNA.

Authors:  Dimithree Kahanda; Kevin T DuPrez; Eduardo Hilario; Marc A McWilliams; Chris H Wohlgamuth; Li Fan; Jason D Slinker
Journal:  Anal Chem       Date:  2018-01-17       Impact factor: 6.986

2.  2'-Deoxy-2'-fluoro-arabinonucleic acid: a valid alternative to DNA for biotechnological applications using charge transport.

Authors:  Ruijie D Teo; Elizabeth R Smithwick; Agostino Migliore
Journal:  Phys Chem Chem Phys       Date:  2019-10-24       Impact factor: 3.676

3.  Rationalizing Sequence and Conformational Effects on the Guanine Oxidation in Different DNA Conformations.

Authors:  Alessandro Nicola Nardi; Alessio Olivieri; Marco D'Abramo
Journal:  J Phys Chem B       Date:  2022-06-07       Impact factor: 3.466

4.  Following anticancer drug activity in cell lysates with DNA devices.

Authors:  Dimithree Kahanda; Naveen Singh; David A Boothman; Jason D Slinker
Journal:  Biosens Bioelectron       Date:  2018-07-30       Impact factor: 12.545

5.  DNA Electrochemistry: Charge-Transport Pathways through DNA Films on Gold.

Authors:  Adela Nano; Ariel L Furst; Michael G Hill; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2021-07-26       Impact factor: 16.383

6.  Bridge- and solvent-mediated intramolecular electronic communications in ubiquinone-based biomolecular wires.

Authors:  Xiao-Yuan Liu; Wei Ma; Hao Zhou; Xiao-Ming Cao; Yi-Tao Long
Journal:  Sci Rep       Date:  2015-05-21       Impact factor: 4.379

7.  Switchable DNA wire: deposition-stripping of copper nanoclusters as an "ON-OFF" nanoswitch.

Authors:  Xiaoli Zhu; Siyu Liu; Jiepei Cao; Xiaoxia Mao; Genxi Li
Journal:  Sci Rep       Date:  2016-01-19       Impact factor: 4.379

8.  Electrochemical nucleic acid detection based on parallel structural dsDNA/recombinant azurin hybrid.

Authors:  Mohsen Mohammadniaei; Taek Lee; Jinho Yoon; Donghyun Lee; Jeong-Woo Choi
Journal:  Biosens Bioelectron       Date:  2017-07-05       Impact factor: 10.618

9.  High-Precision Electrochemical Measurements of the Guanine-, Mismatch-, and Length-Dependence of Electron Transfer from Electrode-Bound DNA Are Consistent with a Contact-Mediated Mechanism.

Authors:  Philippe Dauphin-Ducharme; Netzahualcóyotl Arroyo-Currás; Kevin W Plaxco
Journal:  J Am Chem Soc       Date:  2019-01-11       Impact factor: 15.419

10.  Theoretical Characterization of the Reduction Potentials of Nucleic Acids in Solution.

Authors:  Valeria D'Annibale; Alessandro Nicola Nardi; Andrea Amadei; Marco D'Abramo
Journal:  J Chem Theory Comput       Date:  2021-02-23       Impact factor: 6.006

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