Literature DB >> 23963891

Yeast two-hybrid analysis of PriB-interacting proteins in replication restart primosome: a proposed PriB-SSB interaction model.

Yen-Hua Huang1, Min-Jon Lin, Cheng-Yang Huang.   

Abstract

PriB is one of the components of the replication restart primosome. The activity mediated by the primosomal proteins, including PriB, is required for reinitiating chromosomal DNA replication in bacteria after DNA damage. As such, the study of the interactions between PriB and members in the primosome is essential to better understand their mechanism of action. In this study, we investigated PriB-interacting proteins in the primosome through the yeast two-hybrid system. Yeast two-hybrid analysis using two strains, Y187 and AH109, revealed that PriB interacts with PriA, DnaT, SSB, and itself and does not interact with DnaA, DnaB, DnaC, or DnaG. In addition, mutational analysis showed that PriB may bind to SSB via K82, K84, and K89 in the L(45) loop. Based on these preliminary data, we proposed a PriB-SSB interaction model. Further work can focus on determination of how PriB binds to the PriA-SSB complex in replication restart.

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Year:  2013        PMID: 23963891     DOI: 10.1007/s10930-013-9509-y

Source DB:  PubMed          Journal:  Protein J        ISSN: 1572-3887            Impact factor:   2.371


  48 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

Review 2.  Nucleic acid recognition by OB-fold proteins.

Authors:  Douglas L Theobald; Rachel M Mitton-Fry; Deborah S Wuttke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-18

Review 3.  Okazaki fragment maturation: nucleases take centre stage.

Authors:  Li Zheng; Binghui Shen
Journal:  J Mol Cell Biol       Date:  2011-02       Impact factor: 6.216

4.  Escherichia coli PriA protein, two modes of DNA binding and activation of ATP hydrolysis.

Authors:  Taku Tanaka; Toshimi Mizukoshi; Kaori Sasaki; Daisuke Kohda; Hisao Masai
Journal:  J Biol Chem       Date:  2007-05-04       Impact factor: 5.157

5.  Crystal structure of the N-terminal domain of Geobacillus kaustophilus HTA426 DnaD protein.

Authors:  Cheng-Yang Huang; Yi-Wei Chang; Wei-Ti Chen
Journal:  Biochem Biophys Res Commun       Date:  2008-08-12       Impact factor: 3.575

Review 6.  Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase.

Authors:  Smita S Patel; Manjula Pandey; Divya Nandakumar
Journal:  Curr Opin Chem Biol       Date:  2011-08-22       Impact factor: 8.822

7.  Characterization of a single-stranded DNA binding protein from Salmonella enterica serovar Typhimurium LT2.

Authors:  Yen-Hua Huang; Yen-Ling Lee; Cheng-Yang Huang
Journal:  Protein J       Date:  2011-02       Impact factor: 2.371

8.  Gene duplication with displacement and rearrangement: origin of the bacterial replication protein PriB from the single-stranded DNA-binding protein Ssb.

Authors:  Vladimir A Ponomarev; Kira S Makarova; L Aravind; Eugene V Koonin
Journal:  J Mol Microbiol Biotechnol       Date:  2003

Review 9.  Recombinational repair and restart of damaged replication forks.

Authors:  Peter McGlynn; Robert G Lloyd
Journal:  Nat Rev Mol Cell Biol       Date:  2002-11       Impact factor: 94.444

10.  Complexed crystal structure of replication restart primosome protein PriB reveals a novel single-stranded DNA-binding mode.

Authors:  Cheng-Yang Huang; Che-Hsiung Hsu; Yuh-Ju Sun; Huey-Nan Wu; Chwan-Deng Hsiao
Journal:  Nucleic Acids Res       Date:  2006-08-09       Impact factor: 16.971

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  4 in total

1.  Structure and Function of the PriC DNA Replication Restart Protein.

Authors:  Sarah R Wessel; Claudia C Cornilescu; Gabriel Cornilescu; Alice Metz; Maxime Leroux; Kaifeng Hu; Steven J Sandler; John L Markley; James L Keck
Journal:  J Biol Chem       Date:  2016-07-05       Impact factor: 5.157

2.  Structural insight into the DNA-binding mode of the primosomal proteins PriA, PriB, and DnaT.

Authors:  Yen-Hua Huang; Cheng-Yang Huang
Journal:  Biomed Res Int       Date:  2014-07-21       Impact factor: 3.411

Review 3.  Mechanisms of bacterial DNA replication restart.

Authors:  Tricia A Windgassen; Sarah R Wessel; Basudeb Bhattacharyya; James L Keck
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

Review 4.  The Macromolecular Machines that Duplicate the Escherichia coli Chromosome as Targets for Drug Discovery.

Authors:  Jon M Kaguni
Journal:  Antibiotics (Basel)       Date:  2018-03-14
  4 in total

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