Literature DB >> 23946336

Comparison between southern blots and qPCR analysis of leukocyte telomere length in the health ABC study.

Clara C Elbers1, Melissa E Garcia, Masayuki Kimura, Steven R Cummings, Mike A Nalls, Anne B Newman, Vicki Park, Jason L Sanders, Gregory J Tranah, Sarah A Tishkoff, Tamara B Harris, Abraham Aviv.   

Abstract

Only a few studies, primarily limited to small samples, have examined the relationship between leukocyte telomere length (LTL) data generated by Southern blots, expressed in kilobases, versus quantitative PCR data, expressed in the telomere product/a single gene product (T/S). In the present study, we compared LTL data generated by the two methods in 681 elderly participants (50% African Americans, 50% of European origin, 49.2% women, mean age 73.7±2.9 years) in the Health Aging and Body Composition Study. The correlation between the data generated by the two methods was modest (R (2) = .27). Both methods captured the age effect on LTL and the longer LTL in women than in men. However, only the Southern blot method showed a significantly longer LTL in African Americans than in European decent individuals, which might be attributed to the larger measurement error of the quantitative PCR-based method than the Southern blots.

Entities:  

Keywords:  Leukocyte telomere length; Quantitative PCR; Southern blots.

Mesh:

Year:  2013        PMID: 23946336      PMCID: PMC4049151          DOI: 10.1093/gerona/glt121

Source DB:  PubMed          Journal:  J Gerontol A Biol Sci Med Sci        ISSN: 1079-5006            Impact factor:   6.053


  20 in total

1.  Telomere measurement by quantitative PCR.

Authors:  Richard M Cawthon
Journal:  Nucleic Acids Res       Date:  2002-05-15       Impact factor: 16.971

2.  Mapping of a major locus that determines telomere length in humans.

Authors:  Mariuca Vasa-Nicotera; Scott Brouilette; Massimo Mangino; John R Thompson; Peter Braund; Jenny-Rebecca Clemitson; Andrea Mason; Clare L Bodycote; Stuart M Raleigh; Edward Louis; Nilesh J Samani
Journal:  Am J Hum Genet       Date:  2004-11-01       Impact factor: 11.025

3.  Association of shorter leukocyte telomere repeat length with dementia and mortality.

Authors:  Lawrence S Honig; Min Suk Kang; Nicole Schupf; Joseph H Lee; Richard Mayeux
Journal:  Arch Neurol       Date:  2012-10

4.  Leukocyte telomere length and cardiovascular disease in the cardiovascular health study.

Authors:  Annette L Fitzpatrick; Richard A Kronmal; Jeffrey P Gardner; Bruce M Psaty; Nancy S Jenny; Russell P Tracy; Jeremy Walston; Masyuki Kimura; Abraham Aviv
Journal:  Am J Epidemiol       Date:  2006-10-16       Impact factor: 4.897

5.  Mapping genetic loci that determine leukocyte telomere length in a large sample of unselected female sibling pairs.

Authors:  Toby Andrew; Abraham Aviv; Mario Falchi; Gabriela L Surdulescu; Jeffrey P Gardner; Xiaobin Lu; Masayuki Kimura; Bernet S Kato; Ana M Valdes; Tim D Spector
Journal:  Am J Hum Genet       Date:  2006-01-06       Impact factor: 11.025

6.  Genetic determination of telomere size in humans: a twin study of three age groups.

Authors:  P E Slagboom; S Droog; D I Boomsma
Journal:  Am J Hum Genet       Date:  1994-11       Impact factor: 11.025

7.  Association of leukocyte telomere length with circulating biomarkers of the renin-angiotensin-aldosterone system: the Framingham Heart Study.

Authors:  Ramachandran S Vasan; Serkalem Demissie; Masayuki Kimura; L Adrienne Cupples; Nader Rifai; Charles White; Thomas J Wang; Jeffrey P Gardner; Xiaogian Cao; Emelia J Benjamin; Daniel Levy; Abraham Aviv
Journal:  Circulation       Date:  2008-02-11       Impact factor: 29.690

8.  Race/ethnicity and telomere length in the Multi-Ethnic Study of Atherosclerosis.

Authors:  Ana V Diez Roux; Nalini Ranjit; Nancy S Jenny; Steven Shea; Mary Cushman; Annette Fitzpatrick; Teresa Seeman
Journal:  Aging Cell       Date:  2009-03-17       Impact factor: 9.304

9.  Leukocyte telomeres are longer in African Americans than in whites: the National Heart, Lung, and Blood Institute Family Heart Study and the Bogalusa Heart Study.

Authors:  Steven C Hunt; Wei Chen; Jeffrey P Gardner; Masayuki Kimura; Sathanur R Srinivasan; John H Eckfeldt; Gerald S Berenson; Abraham Aviv
Journal:  Aging Cell       Date:  2008-05-02       Impact factor: 9.304

10.  Telomere length measurement by a novel monochrome multiplex quantitative PCR method.

Authors:  Richard M Cawthon
Journal:  Nucleic Acids Res       Date:  2009-01-07       Impact factor: 16.971

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  43 in total

Review 1.  Ancestry, Telomere Length, and Atherosclerosis Risk.

Authors:  Athanase Benetos; Abraham Aviv
Journal:  Circ Cardiovasc Genet       Date:  2017-06

2.  Leukocyte telomere length and cardiovascular disease in African Americans: The Jackson Heart Study.

Authors:  Stanford Mwasongwe; Yan Gao; Michael Griswold; James G Wilson; Abraham Aviv; Alexander P Reiner; Laura M Raffield
Journal:  Atherosclerosis       Date:  2017-09-15       Impact factor: 5.162

3.  Usefulness of telomere length in DNA from human teeth for age estimation.

Authors:  Ana Belén Márquez-Ruiz; Lucas González-Herrera; Aurora Valenzuela
Journal:  Int J Legal Med       Date:  2017-04-24       Impact factor: 2.686

4.  A scoping systematic review of social stressors and various measures of telomere length across the life course.

Authors:  Margaret Willis; Shaina N Reid; Esteban Calvo; Ursula M Staudinger; Pam Factor-Litvak
Journal:  Ageing Res Rev       Date:  2018-07-23       Impact factor: 10.895

5.  Possible technical and biological explanations for the 'parental telomere length inheritance discrepancy' enigma.

Authors:  Tim De Meyer; Dan T A Eisenberg
Journal:  Eur J Hum Genet       Date:  2014-04-23       Impact factor: 4.246

6.  Increased Cellular Aging by 3 Years of Age in Latino, Preschool Children Who Consume More Sugar-Sweetened Beverages: A Pilot Study.

Authors:  Janet M Wojcicki; Rosalinda Medrano; Jue Lin; Elissa Epel
Journal:  Child Obes       Date:  2017-11-17       Impact factor: 2.992

Review 7.  Air Pollution Stress and the Aging Phenotype: The Telomere Connection.

Authors:  Dries S Martens; Tim S Nawrot
Journal:  Curr Environ Health Rep       Date:  2016-09

8.  Shorter telomere length in Europeans than in Africans due to polygenetic adaptation.

Authors:  Matthew E B Hansen; Steven C Hunt; Rivka C Stone; Kent Horvath; Utz Herbig; Alessia Ranciaro; Jibril Hirbo; William Beggs; Alexander P Reiner; James G Wilson; Masayuki Kimura; Immaculata De Vivo; Maxine M Chen; Jeremy D Kark; Daniel Levy; Thomas Nyambo; Sarah A Tishkoff; Abraham Aviv
Journal:  Hum Mol Genet       Date:  2016-03-02       Impact factor: 6.150

9.  Telomere Length Among Older U.S. Adults: Differences by Race/Ethnicity, Gender, and Age.

Authors:  Lauren Brown; Belinda Needham; Jennifer Ailshire
Journal:  J Aging Health       Date:  2016-07-27

10.  Biological aging in childhood and adolescence following experiences of threat and deprivation: A systematic review and meta-analysis.

Authors:  Natalie L Colich; Maya L Rosen; Eileen S Williams; Katie A McLaughlin
Journal:  Psychol Bull       Date:  2020-08-03       Impact factor: 17.737

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