Literature DB >> 23943879

Probing cellular processes by long-term live imaging--historic problems and current solutions.

Daniel L Coutu1, Timm Schroeder.   

Abstract

Living organisms, tissues, cells and molecules are highly dynamic. The importance of their continuous and long-term observation has been recognized for over a century but has been limited by technological hurdles. Improvements in imaging technologies, genetics, protein engineering and data analysis have more recently allowed us to answer long-standing questions in biology using quantitative continuous long-term imaging. This requires a multidisciplinary collaboration between scientists of various backgrounds: biologists asking relevant questions, imaging specialists and engineers developing hardware, and informaticians and mathematicians developing software for data acquisition, analysis and computational modeling. Despite recent improvements, there are still obstacles to be addressed before this technology can achieve its full potential. This Commentary aims at providing an overview of currently available technologies for quantitative continuous long-term single-cell imaging, their limitations and what is required to bring this field to the next level. We provide an historical perspective on the development of this technology and discuss key issues in time-lapse imaging: keeping cells alive, using labels, reporters and biosensors, and hardware and software requirements. We highlight crucial and often non-obvious problems for researchers venturing into the field and hope to inspire experts in the field and from related disciplines to contribute to future solutions.

Keywords:  Biosensors; Fluorescence; Hardware; Single-cell imaging; Software; Time-lapse microscopy

Mesh:

Year:  2013        PMID: 23943879     DOI: 10.1242/jcs.118349

Source DB:  PubMed          Journal:  J Cell Sci        ISSN: 0021-9533            Impact factor:   5.285


  36 in total

1.  The CellBorderTracker, a novel tool to quantitatively analyze spatiotemporal endothelial junction dynamics at the subcellular level.

Authors:  Jochen Seebach; Abdallah Abu Taha; Janine Lenk; Nico Lindemann; Xiaoyi Jiang; Klaus Brinkmann; Sven Bogdan; Hans-Joachim Schnittler
Journal:  Histochem Cell Biol       Date:  2015-08-15       Impact factor: 4.304

2.  Time-lapse lens-free imaging of cell migration in diverse physical microenvironments.

Authors:  Evelien Mathieu; Colin D Paul; Richard Stahl; Geert Vanmeerbeeck; Veerle Reumers; Chengxun Liu; Konstantinos Konstantopoulos; Liesbet Lagae
Journal:  Lab Chip       Date:  2016-08-16       Impact factor: 6.799

3.  Long-Term Mg2+ Imaging in Live Cells with a Targetable Fluorescent Probe.

Authors:  Priya Ranjan Sahoo; Toshiyuki Kowada; Shin Mizukami
Journal:  Methods Mol Biol       Date:  2021

Review 4.  Single-cell technologies sharpen up mammalian stem cell research.

Authors:  Philipp S Hoppe; Daniel L Coutu; Timm Schroeder
Journal:  Nat Cell Biol       Date:  2014-10       Impact factor: 28.824

5.  Time-Lapse Video Microscopy for Assessment of EYFP-Parkin Aggregation as a Marker for Cellular Mitophagy.

Authors:  Gabriele Di Sante; Mathew C Casimiro; Timothy G Pestell; Richard G Pestell
Journal:  J Vis Exp       Date:  2016-05-04       Impact factor: 1.355

Review 6.  Challenges in long-term imaging and quantification of single-cell dynamics.

Authors:  Stavroula Skylaki; Oliver Hilsenbeck; Timm Schroeder
Journal:  Nat Biotechnol       Date:  2016-11-08       Impact factor: 54.908

7.  Multicolor 3D Confocal Imaging of Thick Tissue Sections.

Authors:  Leo Kunz; Daniel L Coutu
Journal:  Methods Mol Biol       Date:  2021

8.  Multicolor quantitative confocal imaging cytometry.

Authors:  Daniel L Coutu; Konstantinos D Kokkaliaris; Leo Kunz; Timm Schroeder
Journal:  Nat Methods       Date:  2017-11-13       Impact factor: 28.547

9.  Ptychographic imaging of NaD1 induced yeast cell death.

Authors:  Nicholas Anthony; Connie Darmanin; Mark R Bleackley; Kathy Parisi; Guido Cadenazzi; Susannah Holmes; Marilyn A Anderson; Keith A Nugent; Brian Abbey
Journal:  Biomed Opt Express       Date:  2019-09-06       Impact factor: 3.732

10.  Culture of Adult Transgenic Zebrafish Retinal Explants for Live-cell Imaging by Multiphoton Microscopy.

Authors:  Manuela Lahne; Ryne A Gorsuch; Craig M Nelson; David R Hyde
Journal:  J Vis Exp       Date:  2017-02-24       Impact factor: 1.355

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