Literature DB >> 23943414

Rosavirus: the prototype of a proposed new genus of the Picornaviridae family.

Tung Gia Phan1, Nguyen Phung Vo, Peter Simmonds, Erik Samayoa, Samia Naccache, Charles Y Chiu, Eric Delwart.   

Abstract

We describe a 8,724-nucleotide-long picornavirus genome encoding a single 2,470-aa polyprotein obtained from the feces of a wild mouse. Rosavirus is genetically closest to the double ORF Dicipivirus found in canine feces that is currently the only picornavirus with a second internal ribosome entry site (IRES). Of note, a section of rosavirus' 5'UTR showed strong sequence and structural conservation with the type II IRES from the Parechovirus and Hungarovirus genera possibly reflecting exchange of genetic modules between genera. Based on genetic distance criteria rosavirus qualifies as prototype of a new genus of the Picornaviridae family.

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Year:  2013        PMID： 23943414      PMCID： PMC4160104          DOI： 10.1007/s11262-013-0968-1

Source DB:  PubMed          Journal:  Virus Genes        ISSN： 0920-8569            Impact factor:   2.332


  12 in total

1.  The 2A proteins of three diverse picornaviruses are related to each other and to the H-rev107 family of proteins involved in the control of cell proliferation.

Authors:  P J Hughes; G Stanway
Journal:  J Gen Virol       Date:  2000-01       Impact factor: 3.891

2.  Partitioning the genetic diversity of a virus family: approach and evaluation through a case study of picornaviruses.

Authors:  Chris Lauber; Alexander E Gorbalenya
Journal:  J Virol       Date:  2012-01-25       Impact factor: 5.103

3.  Cleavage site analysis in picornaviral polyproteins: discovering cellular targets by neural networks.

Authors:  N Blom; J Hansen; D Blaas; S Brunak
Journal:  Protein Sci       Date:  1996-11       Impact factor: 6.725

4.  Myristylation of picornavirus capsid protein VP4 and its structural significance.

Authors:  M Chow; J F Newman; D Filman; J M Hogle; D J Rowlands; F Brown
Journal:  Nature       Date:  1987 Jun 11-17       Impact factor: 49.962

Review 5.  An analysis of 5'-noncoding sequences from 699 vertebrate messenger RNAs.

Authors:  M Kozak
Journal:  Nucleic Acids Res       Date:  1987-10-26       Impact factor: 16.971

6.  Natural occurrence and characterization of two internal ribosome entry site elements in a novel virus, canine picodicistrovirus, in the picornavirus-like superfamily.

Authors:  Patrick C Y Woo; Susanna K P Lau; Garnet K Y Choi; Yi Huang; Jade L L Teng; Hoi-Wah Tsoi; Herman Tse; Man Lung Yeung; Kwok-Hung Chan; Dong-Yan Jin; Kwok-Yung Yuen
Journal:  J Virol       Date:  2011-12-28       Impact factor: 5.103

7.  In vivo and in vitro identification of structural and sequence elements of the human parechovirus 5' untranslated region required for internal initiation.

Authors:  A S Nateri; P J Hughes; G Stanway
Journal:  J Virol       Date:  2000-07       Impact factor: 5.103

8.  Multiple novel astrovirus species in human stool.

Authors:  A Kapoor; L Li; J Victoria; B Oderinde; C Mason; P Pandey; S Z Zaidi; E Delwart
Journal:  J Gen Virol       Date:  2009-08-19       Impact factor: 3.891

9.  The fecal viral flora of wild rodents.

Authors:  Tung G Phan; Beatrix Kapusinszky; Chunlin Wang; Robert K Rose; Howard L Lipton; Eric L Delwart
Journal:  PLoS Pathog       Date:  2011-09-01       Impact factor: 6.823

10.  Two closely related novel picornaviruses in cattle and sheep in Hungary from 2008 to 2009, proposed as members of a new genus in the family Picornaviridae.

Authors:  Gábor Reuter; Péter Pankovics; Nick J Knowles; Ákos Boros
Journal:  J Virol       Date:  2012-09-26       Impact factor: 5.103
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  5 in total

1.  Widespread distribution and structural diversity of Type IV IRESs in members of Picornaviridae.

Authors:  Mukta Asnani; Parimal Kumar; Christopher U T Hellen
Journal:  Virology       Date:  2015-02-27       Impact factor: 3.616

2.  Discovery of rosavirus 2, a novel variant of a rodent-associated picornavirus, in children from The Gambia.

Authors:  Efrem S Lim; Song Cao; Lori R Holtz; Martin Antonio; O Colin Stine; David Wang
Journal:  Virology       Date:  2014-02-20       Impact factor: 3.616

3.  Detection of zoonotic pathogens and characterization of novel viruses carried by commensal Rattus norvegicus in New York City.

Authors:  Cadhla Firth; Meera Bhat; Matthew A Firth; Simon H Williams; Matthew J Frye; Peter Simmonds; Juliette M Conte; James Ng; Joel Garcia; Nishit P Bhuva; Bohyun Lee; Xiaoyu Che; Phenix-Lan Quan; W Ian Lipkin
Journal:  MBio       Date:  2014-10-14       Impact factor: 7.867

4.  Initiation on the divergent Type I cadicivirus IRES: factor requirements and interactions with the translation apparatus.

Authors:  Mukta Asnani; Tatyana V Pestova; Christopher U T Hellen
Journal:  Nucleic Acids Res       Date:  2016-02-11       Impact factor: 16.971

5.  Identification of Novel Rosavirus Species That Infects Diverse Rodent Species and Causes Multisystemic Dissemination in Mouse Model.

Authors:  Susanna K P Lau; Patrick C Y Woo; Kenneth S M Li; Hao-Ji Zhang; Rachel Y Y Fan; Anna J X Zhang; Brandon C C Chan; Carol S F Lam; Cyril C Y Yip; Ming-Chi Yuen; Kwok-Hung Chan; Zhi-Wei Chen; Kwok-Yung Yuen
Journal:  PLoS Pathog       Date:  2016-10-13       Impact factor: 6.823
  5 in total

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