| Literature DB >> 23940792 |
Christian M Hagen1, Frederik H Aidt, Paula L Hedley, Morten K Jensen, Ole Havndrup, Jørgen K Kanters, Johanna C Moolman-Smook, Severin O Larsen, Henning Bundgaard, Michael Christiansen.
Abstract
Hypertrophic cardiomyopathy (HCM) is a genetic disorder caused by mutations in genes coding for proteins involved in sarcomere function. The disease is associated with mitochondrial dysfunction. Evolutionarily developed variation in mitochondrial DNA (mtDNA), defining mtDNA haplogroups and haplogroup clusters, is associated with functional differences in mitochondrial function and susceptibility to various diseases, including ischemic cardiomyopathy. We hypothesized that mtDNA haplogroups, in particular H, J and K, might modify disease susceptibility to HCM. Mitochondrial DNA, isolated from blood, was sequenced and haplogroups identified in 91 probands with HCM. The association with HCM was ascertained using two Danish control populations. Haplogroup H was more prevalent in HCM patients, 60% versus 46% (p = 0.006) and 41% (p = 0.003), in the two control populations. Haplogroup J was less prevalent, 3% vs. 12.4% (p = 0.017) and 9.1%, (p = 0.06). Likewise, the UK haplogroup cluster was less prevalent in HCM, 11% vs. 22.1% (p = 0.02) and 22.8% (p = 0.04). These results indicate that haplogroup H constitutes a susceptibility factor and that haplogroup J and haplogroup cluster UK are protective factors in the development of HCM. Thus, constitutive differences in mitochondrial function may influence the occurrence and clinical presentation of HCM. This could explain some of the phenotypic variability in HCM. The fact that haplogroup H and J are also modifying factors in ischemic cardiomyopathy suggests that mtDNA haplotypes may be of significance in determining whether a physiological hypertrophy develops into myopathy. mtDNA haplotypes may have the potential of becoming significant biomarkers in cardiomyopathy.Entities:
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Year: 2013 PMID: 23940792 PMCID: PMC3734310 DOI: 10.1371/journal.pone.0071904
Source DB: PubMed Journal: PLoS One ISSN: 1932-6203 Impact factor: 3.240
Figure 1Simplified mtDNA tree based on PhyloTree mtDNA tree Build 15 (30 Sep 2012) (www.phylotree.org).
Table of haplogroup defining variants used by Benn et al. for mtDNA haplotyping.
| Coding-region mtDNA haplogroup markers used by Benn et al. | ||||||
|---|---|---|---|---|---|---|
| Haplogroup: | mt. 7028 | mt. 10398 | mt. 11719 | mt. 12308 | mt. 12612 | mt.15607 |
| H | C | A | G | A | A | A |
| HV | T | A | G | A | A | A |
| K | T | G | A | G | A | A |
| U | T | A | A | G | A | A |
| W/I | T | A | A | A | A | A |
| T | T | A | A | A | A | G |
| J | T | A | A | A | G | A |
Table of haplogroup defining variants used in this study for mtDNA haplotyping.
| mtDNA haplogroup markers used in this study. | ||||||
|---|---|---|---|---|---|---|
| Haplogroup: | Diagnostic SNP: | |||||
| H | 7028C | 2706A | 14766C | |||
| U | 11467G | 12308G | ||||
| T | 11251G | 15607G | 4917G | |||
| K | 11467G | 12308G | 10550G | 11299C | ||
| J | 11251G | 13708A | 15452A | 10398G | ||
| I | 10034C | 9548G | ||||
| W | 10034T | 11947G | ||||
| X | 10034T | 11947A | 6371T | |||
| HV | 14766C | 11719G | ||||
| V | 4580A | |||||
| D | 5178A | 16362C | ||||
| E | 13626T | |||||
| N | 8701A | 10873T | ||||
| L3 | 1018G | 10400C | 10873C | |||
| R | 12705C | 14766T | 11251A | 8281-8289d! | 15607A | 11467A |
!:8281-8289 not present.
Demographic and clinical characteristics of HCM probands.
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Mean (SD). 1 In index patients > 18 years of age. BP, blood pressure; LA, left atrial diameter; MaxLVD, maximal left ventricular wall thickness: MaxIVS, maximal interventricular wall thickness.
Distribution of haplogroups in the HCM cohort and two control populations.
| Haplogroup | HCM cohort (n=91). | Benn et al. 2008 (n=9254) | Mikkelsen et al. 2010 (n=201) |
|---|---|---|---|
| H | 60,4 (55) | 45,9 (4244) | 41,1 (83) |
| U | 9,9 (9) | 15,9 (1469) | 12,9 (26) |
| T | 13,2 (12) | 9,9 (912) | 8,4 (17) |
| J | 3,3 (3) | 9,1 (843) | 12,4 (25) |
| I | 1,1 (1) | 3,81 (350) | 3 (6) |
| W | 0 | 3,81 (350) | 0,5 (1) |
| X | 2,2 (2) | n.d | 1 (2) |
| K | 2,2 (2) | 6,2 (571) | 9,9 (20) |
| HV | 1,1 (1) | 4,52 (412) | 3,5 (7) |
| V | 4,4 (4) | 4,52 (412) | n.d |
| Z | 0 | 3,5 (324) | n.d |
| N | 0 | n.d | 1 |
| L3 | 0 | n.d | 0,5 (1) |
| R | 0 | n.d | 5,9 (12) |
| D | 1.1(1) | n.d | n.d |
| E | 1.1 (1) | n.d | n.d |
1 Haplogroup was not distinguished;.
Odds-ratios for HCM of haplogroups or combinations of haplogroups compared to Benn et al. 2008.
| HCM-cohort vs. Benn et al. | Test setup. | Fisher’s exact test P-value | Odds-ratio | 95% Confidence Interval |
|---|---|---|---|---|
| Haplogroups compared | H vs. Non-H | 0,006 | 1,8 | 1,16-2,83 |
| U vs. Non-U | 0,147 | 0,58 | 0,26-1,16 | |
| T vs. Non-T | 0,288 | 1,39 | 0,69-2,58 | |
| J vs. Non-J | 0,063 | 0,34 | 0,07-1,03 | |
| I+W vs. Non-I+W | 0,265 | 0,28 | 0,007-1,62 | |
| K vs. Non-K | 0,181 | 0,34 | 0,04-1,28 | |
| Cluster comparison. | HV vs. Non-HV | 0.003 | 1.91 | 1.22-3.07 |
| UK vs. Non-UK | 0.021 | 0.49 | 0.23-0.92 | |
| JT vs. Non-JT | 0.683 | 0.84 | 0.45-1.48 |
Odds-ratios for HCM of haplogroups or combinations of haplogroups compared to Mikkelsen et al. 2008.
| HCM-cohort vs. Mikkelsen et al. | Test setup. | Fisher’s exact test P-value | Odds-ratio | 95% Confidence Interval |
|---|---|---|---|---|
| Haplogroups compared | H vs. Non-H | 0,003 | 2,17 | 1,27-3,72 |
| U vs. Non-U | 0,561 | 0,74 | 0,29-1,71 | |
| T vs. Non-T | 0,212 | 1,64 | 0,68-3,84 | |
| J vs. Non-J | 0,017 | 0,24 | 0,05-0.82 | |
| I vs. Non-I | 0,442 | 0,36 | 0,007-3.05 | |
| K vs. Non-K | 0,018 | 0,20 | 0,02-0.87 | |
| X vs. Non-X | 0,605 | 2.23 | 0.16-31.2 | |
| Cluster comparison | UK vs. Non-UK | 0.038 | 0.46 | 0.21-0.97 |
| JT vs. Non-JT | 0.43 | 0.75 | 0.36-1.48 | |
| IWX vs. Non-IWX | 0.76 | 0.72 | 0.12-3.0 |
Clinical characteristics and mutation occurrence as a function of haplogroup.
| Haplogroup (n) | H (55) | T(12) | J(3) | K(2) | U(9) | Rest (10) |
|---|---|---|---|---|---|---|
| Median age (range) | 51 (5-77) | 43.3 (8-71) | 38 (19-45) | 44.5 (43-46) | 53 (39-74) | 66.5 (14-76) |
| Mean MaxLVD (SD) | 21.3 (5.2) | 21.8 (4.1) | 22.7 (8.4) | 22.0 (2.0) | 21.3 (3.2) | 17.4 (3.9) |
| Male/female-ratio | 33/22 | 7/5 | 2/1 | 2/0 | 7/2 | 5/5 |
| Mutations | 21 | 8 | 1 | 2 | 4 | 4 |
| Mutations (%) | 41 | 66.6 | 33.3 | 100 | 44 | 40 |