Literature DB >> 23938260

LINE-1 DNA methylation, smoking and risk of Parkinson's disease.

Susan Searles Nielsen1, Harvey Checkoway, Rondi A Butler, Heather H Nelson, Federico M Farin, W T Longstreth, Gary M Franklin, Phillip D Swanson, Karl T Kelsey.   

Abstract

BACKGROUND: Long interspersed nucleotide element-1 (LINE-1) retrotransposons are located throughout the human genome. Those retaining an intact 5' promoter can copy and insert themselves into the DNA of neural progenitor cells that express tyrosine hydroxylase, which may influence differentiation and survival of these cells. LINE-1 promoter methylation is associated with decreased LINE-1 propagation.
OBJECTIVE: To investigate whether LINE-1 promoter methylation is associated with Parkinson's disease (PD).
METHODS: We compared LINE-1 methylation profiles in blood mononuclear cells between 292 newly diagnosed PD cases and 401 unrelated, neurologically normal controls, all non-Hispanic Caucasians in western Washington state.
RESULTS: Overall, PD was not associated with percent methylation of the LINE-1 promoter. However, the predictable inverse association between PD and ever smoking tobacco was strongest for men and women with the lowest LINE-1 promoter methylation, and less apparent as LINE-1 methylation increased. Underlying this possible interaction, ever regularly smoking tobacco was associated with decreased LINE-1 methylation in controls (age- and sex-adjusted linear regression β = -0.24, 95% confidence interval [CI] -0.43, -0.04), but not in cases (β = 0.06, 95% CI -0.17, 0.28, interaction p = 0.06).
CONCLUSION: PD cases may have innate differences in their ability to respond to tobacco smoke.

Entities:  

Mesh:

Year:  2012        PMID: 23938260      PMCID: PMC3962286          DOI: 10.3233/JPD-012129

Source DB:  PubMed          Journal:  J Parkinsons Dis        ISSN: 1877-7171            Impact factor:   5.568


  38 in total

1.  Predictors of global methylation levels in blood DNA of healthy subjects: a combined analysis.

Authors:  Zhong-Zheng Zhu; Lifang Hou; Valentina Bollati; Letizia Tarantini; Barbara Marinelli; Laura Cantone; Allen S Yang; Pantel Vokonas; Jolanta Lissowska; Silvia Fustinoni; Angela C Pesatori; Matteo Bonzini; Pietro Apostoli; Giovanni Costa; Pier Alberto Bertazzi; Wong-Ho Chow; Joel Schwartz; Andrea Baccarelli
Journal:  Int J Epidemiol       Date:  2010-09-15       Impact factor: 7.196

2.  Epigenomic alterations and gene expression profiles in respiratory epithelia exposed to cigarette smoke condensate.

Authors:  F Liu; J K Killian; M Yang; R L Walker; J A Hong; M Zhang; S Davis; Y Zhang; M Hussain; S Xi; M Rao; P A Meltzer; D S Schrump
Journal:  Oncogene       Date:  2010-05-03       Impact factor: 9.867

3.  Implications of LINE1 methylation for bladder cancer risk in women.

Authors:  Charlotte S Wilhelm; Karl T Kelsey; Rondi Butler; Silvia Plaza; Luc Gagne; M Scot Zens; Angeline S Andrew; Steven Morris; Heather H Nelson; Alan R Schned; Margaret R Karagas; Carmen J Marsit
Journal:  Clin Cancer Res       Date:  2010-02-23       Impact factor: 12.531

4.  Somatic mosaicism in neuronal precursor cells mediated by L1 retrotransposition.

Authors:  Alysson R Muotri; Vi T Chu; Maria C N Marchetto; Wei Deng; John V Moran; Fred H Gage
Journal:  Nature       Date:  2005-06-16       Impact factor: 49.962

5.  Correlation of LINE-1 methylation levels in patient-matched buffy coat, serum, buccal cell, and bladder tumor tissue DNA samples.

Authors:  Dana van Bemmel; Petra Lenz; Linda M Liao; Dalsu Baris; Lawrence R Sternberg; Andrew Warner; Alison Johnson; Michael Jones; Masatoshi Kida; Molly Schwenn; Alan R Schned; Debra T Silverman; Nathaniel Rothman; Lee E Moore
Journal:  Cancer Epidemiol Biomarkers Prev       Date:  2012-04-26       Impact factor: 4.254

6.  LINE-1 hypomethylation is associated with bladder cancer risk among nonsmoking Chinese.

Authors:  Haley L Cash; Li Tao; Jian-Min Yuan; Carmen J Marsit; E Andres Houseman; Yong-Bing Xiang; Yu-Tang Gao; Heather H Nelson; Karl T Kelsey
Journal:  Int J Cancer       Date:  2011-05-25       Impact factor: 7.396

7.  DNA methylation in repetitive elements and post-traumatic stress disorder: a case-control study of US military service members.

Authors:  Jennifer A Rusiecki; Ligong Chen; Vasantha Srikantan; Lei Zhang; Liying Yan; Matthew L Polin; Andrea Baccarelli
Journal:  Epigenomics       Date:  2012-02       Impact factor: 4.778

8.  Reactivation of L1 retrotransposon by benzo(a)pyrene involves complex genetic and epigenetic regulation.

Authors:  Ivo Teneng; Diego E Montoya-Durango; James L Quertermous; Mary E Lacy; Kenneth S Ramos
Journal:  Epigenetics       Date:  2011-03-01       Impact factor: 4.528

9.  Environmental tobacco smoke and Parkinson's disease.

Authors:  Susan Searles Nielsen; Lisa G Gallagher; Jessica I Lundin; W T Longstreth; Terri Smith-Weller; Gary M Franklin; Phillip D Swanson; Harvey Checkoway
Journal:  Mov Disord       Date:  2011-11-16       Impact factor: 10.338

10.  Changes in DNA methylation patterns in subjects exposed to low-dose benzene.

Authors:  Valentina Bollati; Andrea Baccarelli; Lifang Hou; Matteo Bonzini; Silvia Fustinoni; Domenico Cavallo; Hyang-Min Byun; Jiayi Jiang; Barbara Marinelli; Angela C Pesatori; Pier A Bertazzi; Allen S Yang
Journal:  Cancer Res       Date:  2007-02-01       Impact factor: 12.701

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  14 in total

1.  Hypomethylation of LINE-1 repeat elements and global loss of DNA hydroxymethylation in vapers and smokers.

Authors:  Andrew W Caliri; Amanda Caceres; Stella Tommasi; Ahmad Besaratinia
Journal:  Epigenetics       Date:  2020-02-05       Impact factor: 4.528

Review 2.  The Role of Transposable Elements of the Human Genome in Neuronal Function and Pathology.

Authors:  Ekaterina Chesnokova; Alexander Beletskiy; Peter Kolosov
Journal:  Int J Mol Sci       Date:  2022-05-23       Impact factor: 6.208

3.  Genotype and age at Parkinson disease diagnosis.

Authors:  Susan Searles Nielsen; Theo K Bammler; Lisa G Gallagher; Federico M Farin; Wt Longstreth; Gary M Franklin; Phillip D Swanson; Harvey Checkoway
Journal:  Int J Mol Epidemiol Genet       Date:  2013-03-18

4.  Nicotine from edible Solanaceae and risk of Parkinson disease.

Authors:  Susan Searles Nielsen; Gary M Franklin; W T Longstreth; Phillip D Swanson; Harvey Checkoway
Journal:  Ann Neurol       Date:  2013-05-09       Impact factor: 10.422

5.  Methamphetamine (MA) Use Induces Specific Changes in LINE-1 Partial Methylation Patterns, Which Are Associated with MA-Induced Paranoia: a Multivariate and Neuronal Network Study.

Authors:  Rasmon Kalayasiri; Korakot Kraijak; Michael Maes; Apiwat Mutirangura
Journal:  Mol Neurobiol       Date:  2018-10-09       Impact factor: 5.590

6.  Higher Alu methylation levels in catch-up growth in twenty-year-old offsprings.

Authors:  Kittipan Rerkasem; Prakasit Rattanatanyong; Amaraporn Rerkasem; Antika Wongthanee; Kittipong Rungruengthanakit; Ampica Mangklabruks; Apiwat Mutirangura
Journal:  PLoS One       Date:  2015-03-25       Impact factor: 3.240

7.  Lack of replication of the GRIN2A-by-coffee interaction in Parkinson disease.

Authors:  Ismaïl Ahmed; Pei-Chen Lee; Christina M Lill; Susan Searles Nielsen; Fanny Artaud; Lisa G Gallagher; Marie-Anne Loriot; Claire Mulot; Magali Nacfer; Tian Liu; Joanna M Biernacka; Sebastian Armasu; Kari Anderson; Federico M Farin; Christina Funch Lassen; Johnni Hansen; Jørgen H Olsen; Lars Bertram; Demetrius M Maraganore; Harvey Checkoway; Beate Ritz; Alexis Elbaz
Journal:  PLoS Genet       Date:  2014-11-20       Impact factor: 5.917

Review 8.  The Role of DNA Methylation and Histone Modifications in Neurodegenerative Diseases: A Systematic Review.

Authors:  Ke-Xin Wen; Jelena Miliç; Bassem El-Khodor; Klodian Dhana; Jana Nano; Tammy Pulido; Bledar Kraja; Asija Zaciragic; Wichor M Bramer; John Troup; Rajiv Chowdhury; M Arfam Ikram; Abbas Dehghan; Taulant Muka; Oscar H Franco
Journal:  PLoS One       Date:  2016-12-14       Impact factor: 3.240

9.  Comprehensive analysis of preeclampsia-associated DNA methylation in the placenta.

Authors:  Tianjiao Chu; Kimberly Bunce; Patricia Shaw; Varsha Shridhar; Andrew Althouse; Carl Hubel; David Peters
Journal:  PLoS One       Date:  2014-09-23       Impact factor: 3.240

10.  LINE-1 methylation in peripheral blood leukocytes and clinical characteristics and prognosis of prostate cancer patients.

Authors:  Yuyan Han; Junfeng Xu; Jeri Kim; Xifeng Wu; Jian Gu
Journal:  Oncotarget       Date:  2017-10-04
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