Literature DB >> 23934110

Interactome map uncovers phosphatidylserine transport by oxysterol-binding proteins.

Kenji Maeda1, Kanchan Anand, Antonella Chiapparino, Arun Kumar, Mattia Poletto, Marko Kaksonen, Anne-Claude Gavin.   

Abstract

The internal organization of eukaryotic cells into functionally specialized, membrane-delimited organelles of unique composition implies a need for active, regulated lipid transport. Phosphatidylserine (PS), for example, is synthesized in the endoplasmic reticulum and then preferentially associates--through mechanisms not fully elucidated--with the inner leaflet of the plasma membrane. Lipids can travel via transport vesicles. Alternatively, several protein families known as lipid-transfer proteins (LTPs) can extract a variety of specific lipids from biological membranes and transport them, within a hydrophobic pocket, through aqueous phases. Here we report the development of an integrated approach that combines protein fractionation and lipidomics to characterize the LTP-lipid complexes formed in vivo. We applied the procedure to 13 LTPs in the yeast Saccharomyces cerevisiae: the six Sec14 homology (Sfh) proteins and the seven oxysterol-binding homology (Osh) proteins. We found that Osh6 and Osh7 have an unexpected specificity for PS. In vivo, they participate in PS homeostasis and the transport of this lipid to the plasma membrane. The structure of Osh6 bound to PS reveals unique features that are conserved among other metazoan oxysterol-binding proteins (OSBPs) and are required for PS recognition. Our findings represent the first direct evidence, to our knowledge, for the non-vesicular transfer of PS from its site of biosynthesis (the endoplasmic reticulum) to its site of biological activity (the plasma membrane). We describe a new subfamily of OSBPs, including human ORP5 and ORP10, that transfer PS and propose new mechanisms of action for a protein family that is involved in several human pathologies such as cancer, dyslipidaemia and metabolic syndrome.

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Year:  2013        PMID: 23934110     DOI: 10.1038/nature12430

Source DB:  PubMed          Journal:  Nature        ISSN: 0028-0836            Impact factor:   49.962


  48 in total

1.  Functional organization of the yeast proteome by systematic analysis of protein complexes.

Authors:  Anne-Claude Gavin; Markus Bösche; Roland Krause; Paola Grandi; Martina Marzioch; Andreas Bauer; Jörg Schultz; Jens M Rick; Anne-Marie Michon; Cristina-Maria Cruciat; Marita Remor; Christian Höfert; Malgorzata Schelder; Miro Brajenovic; Heinz Ruffner; Alejandro Merino; Karin Klein; Manuela Hudak; David Dickson; Tatjana Rudi; Volker Gnau; Angela Bauch; Sonja Bastuck; Bettina Huhse; Christina Leutwein; Marie-Anne Heurtier; Richard R Copley; Angela Edelmann; Erich Querfurth; Vladimir Rybin; Gerard Drewes; Manfred Raida; Tewis Bouwmeester; Peer Bork; Bertrand Seraphin; Bernhard Kuster; Gitte Neubauer; Giulio Superti-Furga
Journal:  Nature       Date:  2002-01-10       Impact factor: 49.962

2.  Copper (II) sulfate charring for high sensitivity on-plate fluorescent detection of lipids and sterols: quantitative analyses of the composition of functional secretory vesicles.

Authors:  Matthew A Churchward; David M Brandman; Tatiana Rogasevskaia; Jens R Coorssen
Journal:  J Chem Biol       Date:  2008-06-17

Review 3.  The distribution and function of phosphatidylserine in cellular membranes.

Authors:  Peter A Leventis; Sergio Grinstein
Journal:  Annu Rev Biophys       Date:  2010       Impact factor: 12.981

4.  Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry.

Authors:  Christer S Ejsing; Julio L Sampaio; Vineeth Surendranath; Eva Duchoslav; Kim Ekroos; Robin W Klemm; Kai Simons; Andrej Shevchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-27       Impact factor: 11.205

5.  A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes.

Authors:  Carsten Janke; Maria M Magiera; Nicole Rathfelder; Christof Taxis; Simone Reber; Hiromi Maekawa; Alexandra Moreno-Borchart; Georg Doenges; Etienne Schwob; Elmar Schiebel; Michael Knop
Journal:  Yeast       Date:  2004-08       Impact factor: 3.239

6.  Jalview Version 2--a multiple sequence alignment editor and analysis workbench.

Authors:  Andrew M Waterhouse; James B Procter; David M A Martin; Michèle Clamp; Geoffrey J Barton
Journal:  Bioinformatics       Date:  2009-01-16       Impact factor: 6.937

Review 7.  Lipid-transfer proteins in biosynthetic pathways.

Authors:  Giovanni D'Angelo; Mariella Vicinanza; Maria Antonietta De Matteis
Journal:  Curr Opin Cell Biol       Date:  2008-05-17       Impact factor: 8.382

8.  Identification of an 11-kDa FKBP12-rapamycin-binding domain within the 289-kDa FKBP12-rapamycin-associated protein and characterization of a critical serine residue.

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Journal:  Proc Natl Acad Sci U S A       Date:  1995-05-23       Impact factor: 11.205

9.  The Pfam protein families database.

Authors:  Marco Punta; Penny C Coggill; Ruth Y Eberhardt; Jaina Mistry; John Tate; Chris Boursnell; Ningze Pang; Kristoffer Forslund; Goran Ceric; Jody Clements; Andreas Heger; Liisa Holm; Erik L L Sonnhammer; Sean R Eddy; Alex Bateman; Robert D Finn
Journal:  Nucleic Acids Res       Date:  2011-11-29       Impact factor: 16.971

10.  Lipid-regulated sterol transfer between closely apposed membranes by oxysterol-binding protein homologues.

Authors:  Timothy A Schulz; Mal-Gi Choi; Sumana Raychaudhuri; Jason A Mears; Rodolfo Ghirlando; Jenny E Hinshaw; William A Prinz
Journal:  J Cell Biol       Date:  2009-12-14       Impact factor: 10.539

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  108 in total

1.  Cell biology: Countercurrents in lipid flow.

Authors:  Anant K Menon; Tim P Levine
Journal:  Nature       Date:  2015-09-10       Impact factor: 49.962

2.  Genome-Wide Association Study Suggested the PTPRD Polymorphisms Were Associated With Weight Gain Effects of Atypical Antipsychotic Medications.

Authors:  Hao Yu; Lifang Wang; Luxian Lv; Cuicui Ma; Bo Du; Tianlan Lu; Chao Jin; Hao Yan; Yongfeng Yang; Wenqiang Li; Yanyan Ruan; Hongyan Zhang; Hongxing Zhang; Weifeng Mi; Bryan Mowry; Wenbin Ma; Keqing Li; Dai Zhang; Weihua Yue
Journal:  Schizophr Bull       Date:  2015-12-09       Impact factor: 9.306

Review 3.  ER-endosome contact sites: molecular compositions and functions.

Authors:  Camilla Raiborg; Eva M Wenzel; Harald Stenmark
Journal:  EMBO J       Date:  2015-06-03       Impact factor: 11.598

4.  Sphingolipid transfer proteins defined by the GLTP-fold.

Authors:  Lucy Malinina; Dhirendra K Simanshu; Xiuhong Zhai; Valeria R Samygina; RaviKanth Kamlekar; Roopa Kenoth; Borja Ochoa-Lizarralde; Margarita L Malakhova; Julian G Molotkovsky; Dinshaw J Patel; Rhoderick E Brown
Journal:  Q Rev Biophys       Date:  2015-03-23       Impact factor: 5.318

Review 5.  Membrane contact sites, gateways for lipid homeostasis.

Authors:  Sujoy Lahiri; Alexandre Toulmay; William A Prinz
Journal:  Curr Opin Cell Biol       Date:  2015-01-06       Impact factor: 8.382

Review 6.  Phosphatidylserine in the brain: metabolism and function.

Authors:  Hee-Yong Kim; Bill X Huang; Arthur A Spector
Journal:  Prog Lipid Res       Date:  2014-06-30       Impact factor: 16.195

Review 7.  Plasma membrane organization promotes virulence of the human fungal pathogen Candida albicans.

Authors:  Lois M Douglas; James B Konopka
Journal:  J Microbiol       Date:  2016-02-27       Impact factor: 3.422

Review 8.  Turning the spotlight on protein-lipid interactions in cells.

Authors:  Tao Peng; Xiaoqiu Yuan; Howard C Hang
Journal:  Curr Opin Chem Biol       Date:  2014-08-15       Impact factor: 8.822

Review 9.  Ca2+ and lipid signals hold hands at endoplasmic reticulum-plasma membrane contact sites.

Authors:  Tamas Balla
Journal:  J Physiol       Date:  2018-01-04       Impact factor: 5.182

Review 10.  Lipid somersaults: Uncovering the mechanisms of protein-mediated lipid flipping.

Authors:  Thomas Günther Pomorski; Anant K Menon
Journal:  Prog Lipid Res       Date:  2016-08-12       Impact factor: 16.195

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