| Literature DB >> 23922103 |
Z Hagman1, B S Haflidadottir, M Ansari, M Persson, A Bjartell, A Edsjö, Y Ceder.
Abstract
BACKGROUND: The microRNA, miR-34c, is a well-established regulator of tumour suppression. It is downregulated in most forms of cancers and inhibits malignant growth by repressing genes involved in processes such as proliferation, anti-apoptosis, stemness, and migration. We have previously reported downregulation and tumour suppressive properties for miR-34c in prostate cancer (PCa).Entities:
Mesh:
Substances:
Year: 2013 PMID: 23922103 PMCID: PMC3778300 DOI: 10.1038/bjc.2013.449
Source DB: PubMed Journal: Br J Cancer ISSN: 0007-0920 Impact factor: 7.640
Sequences of primers for cloning MET 3′-UTR
| Outer forward( Fw) | 5′-GTACTATGTCAAAGCAACAGT-3′ |
| Outer reverse (Rv) | 5′-CATCACTTTACTTTAATTGCAT-3′ |
| Inner Fw | 5′-CTCTCACTAGTCAAAGCAACAGTCCACACT-3′ |
| Inner Rv | 5′-CTCTCAAGCTTGCATGATTTATCAGAACAACT-3′ |
| Fw_mut1 | 5′-TGTCCAATGGTTTTTTAAATGCCTGACCTTTAAAAGGCCAT-3′ |
| Rv_mut1 | 5′-ATGGCCTTTTAAAGGTCAGGCATTTAAAAAACCATTGGACA-3′ |
| Fw_mut2 | 5′-TTAGATACTTGTAAATGCCTATACCTGCAGCTGAACTGAAT-3′ |
| Rv_mut2 | 5′-ATTCAGTTCAGCTGCAGGTATAGGCATTTACAAGTATCTAA-3′ |
Sequences of target site blockers to block the miR-34c-predicted sites in the MET 3′-UTR. Primers for PCR amplification of MET 3′-UTR and the primers used to mutate the miR-34c binding sites.
Top biofunctional pathways affected by miR-34c
| Cell death | Cell death of cell lines | 2.5E-07 |
| Cell death | Cell death of tumor cell lines | 8.8E-07 |
| Cell death | Apoptosis of cell lines | 2.3E-06 |
| Cell death | Apoptosis of tumor cell lines | 4.8E-06 |
| Cell death | Apoptosis of eukaryotic cells | 6.5E-06 |
| Cell death | Cell death of eukaryotic cells | 6.8E-06 |
| Cell death | Apoptosis | 1.1E-05 |
| Cell cycle | Cell division process | 1.2E-05 |
| Cellular growth and proliferation | Proliferation of tumor cells | 1.6E-05 |
| Tumor morphology | Proliferation of tumor cells | 1.6E-05 |
| Cancer | Ovarian cancer | 1.8E-05 |
| Reproductive system disease | Ovarian cancer | 1.8E-05 |
| Cell death | Cell death | 2.2E-05 |
| Cellular development | Angiogenesis of cells | 2.8E-05 |
| Organismal development | Angiogenesis of cells | 2.8E-05 |
| Cardiovascular system development/function | Angiogenesis of cells | 2.8E-05 |
| Cell-to-cell signaling and interaction | Formation of gap junctions | 3.0E-05 |
| Cellular assembly and organization | Formation of gap junctions | 3.0E-05 |
| Cell death | Cell death of breast cancer cell lines | 3.1E-05 |
| Cellular movement | Invasion of cell lines | 3.2E-05 |
| Infection mechanism | Replication of Herpesviridae | 3.7E-05 |
| Cellular growth and proliferation | Proliferation of cancer cells | 4.5E-05 |
| Tumor morphology | Proliferation of cancer cells | 4.5E-05 |
Top canonical pathways affected by miR-34c
| Antigen presentation pathway | 2.5E-05 |
| Interferon signalling | 9.6E-05 |
| Prolactin signalling | 5.3E-04 |
| Erythropoietin signalling | 9.6E-04 |
| Hepatic fibrosis / hepatic stellate cell activation | 0.0013 |
| p70S6K signaling | 0.0020 |
| Role of pattern recognition receptors in recognition of bacteria/viruses | 0.0026 |
| Arginine and proline metabolism | 0.0028 |
| Growth hormone signalling | 0.0030 |
| NF- | 0.0052 |
| Sphingolipid metabolism | 0.0072 |
| HGF signalling | 0.0087 |
| Pentose phosphate pathway | 0.0091 |
Figure 1(A) MET transcript levels, as measured by qRT–PCR, after ectopic expression of miR-34c mimic in PC3. Mean of quadruplicate is shown. HPRT and PGK1 were used as endogenous controls. (B) Western blot on the protein levels of MET after ectopically expressing miR-34c in PC3, PNT2, and DU145 cells. Both the 170 kDa precursor and the 140 kDa mature form of Met are detected. GAPDH and α-actinin were used as loading controls.
Figure 2(A) PC3 cells were transiently co-transfected with MET 3′-UTR and miR-34c or scramble mimics. (B) A schematic picture of the two predicted miR-34c binding site in the 3′-UTR of MET. (C) PC3 cells were transiently co-transfected with MET 3′-UTR and miR-34c mimic or negative control. Mutating either of the miR-34c binding sites abolished the effect. (D) PC3 cells were transiently co-transfected with MET 3′-UTR and antisense LNA miR-34c or scramble antisense control. Mutating either of the miR-34c binding sites did not abolish the effect. Luciferase activity was measured after 24 h and normalised to the co-transfected Renilla.
Figure 3(A) Introduction of MET rescue the phenotype induced by miR-34c. The migration potential of DU145 cells after transfection with miR-34c or scrambled mimics, with or without co-transfecting with a MET expression vector. (B) MET transcript levels as measured by qRT–PCR in prostate cell lines. Mean of quadruplicate is shown. HPRT and PGK1 were used as endogenous controls.
Figure 4(A) The MET protein level was determined by immunostaining and scored by overall intensity (score: 0=no staining; 1=weak; 2=distinct) in the prostatic tissue from 47 prostate cancer patients. (B, C) Significant inverse correlation was observed for miR-34c when comparing MET intensity in the benign epithelium with miR-34c detected with qRT-PCR on an adjacent slide. (D) No significant correlation was observed in malignant epithelium.