Literature DB >> 23920310

Automated prostate segmentation in whole-body MRI scans for epidemiological studies.

Mohamad Habes1, Thilo Schiller, Christian Rosenberg, Martin Burchardt, Wolfgang Hoffmann.   

Abstract

The whole prostatic volume (PV) is an important indicator for benign prostate hyperplasia. Correlating the PV with other clinical parameters in a population-based prospective cohort study (SHIP-2) requires valid prostate segmentation in a large number of whole-body MRI scans. The axial proton density fast spin echo fat saturated sequence is used for prostate screening in SHIP-2. Our automated segmentation method is based on support vector machines (SVM). We used three-dimensional neighborhood information to build classification vectors from automatically generated features and randomly selected 16 MR examinations for validation. The Hausdorff distance reached a mean value of 5.048 ± 2.413, and a mean value of 5.613 ± 2.897 compared to manual segmentation by observers A and B. The comparison between volume measurement of SVM-based segmentation and manual segmentation of observers A and B depicts a strong correlation resulting in Spearman's rank correlation coefficients (ρ) of 0.936 and 0.859, respectively. Our automated methodology based on SVM for prostate segmentation can segment the prostate in WBI scans with good segmentation quality and has considerable potential for integration in epidemiological studies.

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Year:  2013        PMID: 23920310     DOI: 10.1088/0031-9155/58/17/5899

Source DB:  PubMed          Journal:  Phys Med Biol        ISSN: 0031-9155            Impact factor:   3.609


  6 in total

1.  New technique for prostate volume assessment.

Authors:  Mohamad Habes; Jeanette Bahr; Thilo Schiller; Jens-Peter Kühn; Laura Hoppe; Martin Burchardt; Wolfgang Hoffmann
Journal:  World J Urol       Date:  2013-12-05       Impact factor: 4.226

2.  White matter hyperintensities and imaging patterns of brain ageing in the general population.

Authors:  Mohamad Habes; Guray Erus; Jon B Toledo; Tianhao Zhang; Nick Bryan; Lenore J Launer; Yves Rosseel; Deborah Janowitz; Jimit Doshi; Sandra Van der Auwera; Bettina von Sarnowski; Katrin Hegenscheid; Norbert Hosten; Georg Homuth; Henry Völzke; Ulf Schminke; Wolfgang Hoffmann; Hans J Grabe; Christos Davatzikos
Journal:  Brain       Date:  2016-02-24       Impact factor: 13.501

3.  Automatic magnetic resonance prostate segmentation by deep learning with holistically nested networks.

Authors:  Ruida Cheng; Holger R Roth; Nathan Lay; Le Lu; Baris Turkbey; William Gandler; Evan S McCreedy; Tom Pohida; Peter A Pinto; Peter Choyke; Matthew J McAuliffe; Ronald M Summers
Journal:  J Med Imaging (Bellingham)       Date:  2017-08-21

4.  Fully automated prostate whole gland and central gland segmentation on MRI using holistically nested networks with short connections.

Authors:  Ruida Cheng; Nathan Lay; Holger R Roth; Baris Turkbey; Dakai Jin; William Gandler; Evan S McCreedy; Tom Pohida; Peter Pinto; Peter Choyke; Matthew J McAuliffe; Ronald M Summers
Journal:  J Med Imaging (Bellingham)       Date:  2019-06-05

5.  Advanced brain aging: relationship with epidemiologic and genetic risk factors, and overlap with Alzheimer disease atrophy patterns.

Authors:  M Habes; D Janowitz; G Erus; J B Toledo; S M Resnick; J Doshi; S Van der Auwera; K Wittfeld; K Hegenscheid; N Hosten; R Biffar; G Homuth; H Völzke; H J Grabe; W Hoffmann; C Davatzikos
Journal:  Transl Psychiatry       Date:  2016-04-05       Impact factor: 6.222

Review 6.  SHIP-MR and Radiology: 12 Years of Whole-Body Magnetic Resonance Imaging in a Single Center.

Authors:  Norbert Hosten; Robin Bülow; Henry Völzke; Martin Domin; Carsten Oliver Schmidt; Alexander Teumer; Till Ittermann; Matthias Nauck; Stephan Felix; Marcus Dörr; Marcello Ricardo Paulista Markus; Uwe Völker; Amro Daboul; Christian Schwahn; Birte Holtfreter; Torsten Mundt; Karl-Friedrich Krey; Stefan Kindler; Maria Mksoud; Stefanie Samietz; Reiner Biffar; Wolfgang Hoffmann; Thomas Kocher; Jean-Francois Chenot; Andreas Stahl; Frank Tost; Nele Friedrich; Stephanie Zylla; Anke Hannemann; Martin Lotze; Jens-Peter Kühn; Katrin Hegenscheid; Christian Rosenberg; Georgi Wassilew; Stefan Frenzel; Katharina Wittfeld; Hans J Grabe; Marie-Luise Kromrey
Journal:  Healthcare (Basel)       Date:  2021-12-24
  6 in total

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