Literature DB >> 23919535

Directing self-assembly of DNA nanotubes using programmable seeds.

Abdul M Mohammed1, Rebecca Schulman.   

Abstract

Control over when and where nanostructures arise is essential for the self-assembly of dynamic or multicomponent devices. We design and construct a DNA origami seed for the control of DAE-E tile DNA nanotube assembly. Seeds greatly accelerate nanotube nucleation and growth because they serve as nanotube nucleation templates. Seeds also control nanotube circumference. Simulations predict nanotube growth rates and suggest a small nucleation barrier remains when nanotubes grow from seeds.

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Year:  2013        PMID: 23919535     DOI: 10.1021/nl400881w

Source DB:  PubMed          Journal:  Nano Lett        ISSN: 1530-6984            Impact factor:   11.189


  14 in total

1.  Self-assembling DNA nanotubes to connect molecular landmarks.

Authors:  Abdul M Mohammed; Petr Šulc; John Zenk; Rebecca Schulman
Journal:  Nat Nanotechnol       Date:  2016-12-19       Impact factor: 39.213

2.  Equilibrium mechanisms of self-limiting assembly.

Authors:  Michael F Hagan; Gregory M Grason
Journal:  Rev Mod Phys       Date:  2021-06-11       Impact factor: 50.485

3.  Programming DNA Tube Circumference by Tile Offset Connection.

Authors:  Yingwei Zhang; Xianhui Chen; Guangjie Kang; Ruizi Peng; Victor Pan; Ranjani Sundaresan; Pengfei Wang; Yonggang Ke
Journal:  J Am Chem Soc       Date:  2019-12-06       Impact factor: 15.419

4.  Thermodynamics and kinetics of DNA nanotube polymerization from single-filament measurements.

Authors:  Rizal F Hariadi; Bernard Yurke; Erik Winfree
Journal:  Chem Sci       Date:  2015-02-20       Impact factor: 9.825

Review 5.  Dynamic DNA Assemblies in Biomedical Applications.

Authors:  Yaqin Hu; Ying Wang; Jianhua Yan; Nachuan Wen; Hongjie Xiong; Shundong Cai; Qunye He; Dongming Peng; Zhenbao Liu; Yanfei Liu
Journal:  Adv Sci (Weinh)       Date:  2020-06-08       Impact factor: 16.806

6.  Robust nucleation control via crisscross polymerization of highly coordinated DNA slats.

Authors:  Dionis Minev; Christopher M Wintersinger; Anastasia Ershova; William M Shih
Journal:  Nat Commun       Date:  2021-03-19       Impact factor: 14.919

7.  T7 RNA polymerase non-specifically transcribes and induces disassembly of DNA nanostructures.

Authors:  Samuel W Schaffter; Leopold N Green; Joanna Schneider; Hari K K Subramanian; Rebecca Schulman; Elisa Franco
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

Review 8.  C-Linked 8-aryl guanine nucleobase adducts: biological outcomes and utility as fluorescent probes.

Authors:  Richard A Manderville; Stacey D Wetmore
Journal:  Chem Sci       Date:  2016-02-24       Impact factor: 9.825

9.  Feedback regulation of crystal growth by buffering monomer concentration.

Authors:  Samuel W Schaffter; Dominic Scalise; Terence M Murphy; Anusha Patel; Rebecca Schulman
Journal:  Nat Commun       Date:  2020-11-27       Impact factor: 14.919

10.  Seeding, Plating and Electrical Characterization of Gold Nanowires Formed on Self-Assembled DNA Nanotubes.

Authors:  Dulashani R Ranasinghe; Basu R Aryal; Tyler R Westover; Sisi Jia; Robert C Davis; John N Harb; Rebecca Schulman; Adam T Woolley
Journal:  Molecules       Date:  2020-10-20       Impact factor: 4.411

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