Literature DB >> 23918803

Emerging roles of competing endogenous RNAs in cancer: insights from the regulation of PTEN.

Alexander de Giorgio1, Jonathan Krell, Victoria Harding, Justin Stebbing, Leandro Castellano.   

Abstract

The capacity of noncoding RNA to regulate gene expression in health and disease is epitomized by the microRNAs, small ∼22-nucleotide RNAs that target mRNAs to repress their translation into protein. Recently a previously unrecognized gene regulatory layer has emerged, characterized by the ability of a wide range of RNA transcripts to vie for microRNA binding and alleviate the repressive effect of microRNAs on their mRNA targets. Termed competing endogenous RNAs (ceRNAs), these participate in a microRNA-dependent cross talk, producing robust networks that when perturbed may lead to cancer. To date, the tumor suppressor PTEN has been most extensively validated as competing with a variety of ceRNAs in different cancers: reducing these ceRNAs appears to reduce PTEN levels, tipping cells toward cancer progression. In this review we look at ceRNA networks in cancer, their characteristics, and constituent parts, focusing on the insights that can be gained from the studies conducted on PTEN. We also explore the conditions that facilitate ceRNA cross talk, proposing that the disruption of these conditions may represent a general phenomenon in carcinogenesis.

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Year:  2013        PMID: 23918803      PMCID: PMC3811677          DOI: 10.1128/MCB.00683-13

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  82 in total

Review 1.  The widespread regulation of microRNA biogenesis, function and decay.

Authors:  Jacek Krol; Inga Loedige; Witold Filipowicz
Journal:  Nat Rev Genet       Date:  2010-07-27       Impact factor: 53.242

Review 2.  Posttranscriptional regulation of microRNA biogenesis in animals.

Authors:  Haruhiko Siomi; Mikiko C Siomi
Journal:  Mol Cell       Date:  2010-05-14       Impact factor: 17.970

Review 3.  Genome-wide transcription and the implications for genomic organization.

Authors:  Philipp Kapranov; Aarron T Willingham; Thomas R Gingeras
Journal:  Nat Rev Genet       Date:  2007-05-08       Impact factor: 53.242

4.  Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites.

Authors:  Rickard Sandberg; Joel R Neilson; Arup Sarma; Phillip A Sharp; Christopher B Burge
Journal:  Science       Date:  2008-06-20       Impact factor: 47.728

5.  Endogenous miRNA sponge lincRNA-RoR regulates Oct4, Nanog, and Sox2 in human embryonic stem cell self-renewal.

Authors:  Yue Wang; Zhenyu Xu; Junfeng Jiang; Chen Xu; Jiuhong Kang; Lei Xiao; Minjuan Wu; Jun Xiong; Xiaocan Guo; Houqi Liu
Journal:  Dev Cell       Date:  2013-03-28       Impact factor: 12.270

6.  Spatial arrangement of an RNA zipcode identifies mRNAs under post-transcriptional control.

Authors:  Vivek L Patel; Somdeb Mitra; Richard Harris; Adina R Buxbaum; Timothée Lionnet; Michael Brenowitz; Mark Girvin; Matthew Levy; Steven C Almo; Robert H Singer; Jeffrey A Chao
Journal:  Genes Dev       Date:  2012-01-01       Impact factor: 11.361

7.  Mammalian microRNAs predominantly act to decrease target mRNA levels.

Authors:  Huili Guo; Nicholas T Ingolia; Jonathan S Weissman; David P Bartel
Journal:  Nature       Date:  2010-08-12       Impact factor: 49.962

8.  MicroRNA-7, a homeobox D10 target, inhibits p21-activated kinase 1 and regulates its functions.

Authors:  Sirigiri Divijendra Natha Reddy; Kazufumi Ohshiro; Suresh K Rayala; Rakesh Kumar
Journal:  Cancer Res       Date:  2008-10-15       Impact factor: 12.701

9.  Transcribed processed pseudogenes in the human genome: an intermediate form of expressed retrosequence lacking protein-coding ability.

Authors:  Paul M Harrison; Deyou Zheng; Zhaolei Zhang; Nicholas Carriero; Mark Gerstein
Journal:  Nucleic Acids Res       Date:  2005-04-28       Impact factor: 16.971

10.  Gene regulation, modulation, and their applications in gene expression data analysis.

Authors:  Mario Flores; Tzu-Hung Hsiao; Yu-Chiao Chiu; Eric Y Chuang; Yufei Huang; Yidong Chen
Journal:  Adv Bioinformatics       Date:  2013-03-13
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  36 in total

Review 1.  Competing endogenous RNA networks and gastric cancer.

Authors:  Lei-Lei Guo; Chun-Hua Song; Peng Wang; Li-Ping Dai; Jian-Ying Zhang; Kai-Juan Wang
Journal:  World J Gastroenterol       Date:  2015-11-07       Impact factor: 5.742

Review 2.  The Emerging Function and Mechanism of ceRNAs in Cancer.

Authors:  Yunfei Wang; Jiakai Hou; Dandan He; Ming Sun; Peng Zhang; Yonghao Yu; Yiwen Chen
Journal:  Trends Genet       Date:  2016-02-24       Impact factor: 11.639

Review 3.  Endogenous microRNA sponges: evidence and controversy.

Authors:  Daniel W Thomson; Marcel E Dinger
Journal:  Nat Rev Genet       Date:  2016-04-04       Impact factor: 53.242

Review 4.  Competing endogenous RNAs: a target-centric view of small RNA regulation in bacteria.

Authors:  Lionello Bossi; Nara Figueroa-Bossi
Journal:  Nat Rev Microbiol       Date:  2016-09-19       Impact factor: 60.633

5.  Endogenous miRNA and target concentrations determine susceptibility to potential ceRNA competition.

Authors:  Andrew D Bosson; Jesse R Zamudio; Phillip A Sharp
Journal:  Mol Cell       Date:  2014-10-23       Impact factor: 17.970

Review 6.  Oncocers: ceRNA-mediated cross-talk by sponging miRNAs in oncogenic pathways.

Authors:  Sercan Ergun; Serdar Oztuzcu
Journal:  Tumour Biol       Date:  2015-03-27

7.  Hepatitis B virus regulates apoptosis and tumorigenesis through the microRNA-15a-Smad7-transforming growth factor beta pathway.

Authors:  Ningning Liu; Tong Jiao; Yan Huang; Wenjun Liu; Zhiwei Li; Xin Ye
Journal:  J Virol       Date:  2014-12-24       Impact factor: 5.103

8.  Receptor-Independent Ectopic Activity of Prolactin Predicts Aggressive Lung Tumors and Indicates HDACi-Based Therapeutic Strategies.

Authors:  Aurore Le Bescont; Anne-Laure Vitte; Alexandra Debernardi; Sandrine Curtet; Thierry Buchou; Jessica Vayr; Aurélien de Reyniès; Akihiro Ito; Philippe Guardiola; Christian Brambilla; Minoru Yoshida; Elisabeth Brambilla; Sophie Rousseaux; Saadi Khochbin
Journal:  Antioxid Redox Signal       Date:  2014-03-06       Impact factor: 8.401

Review 9.  Clinico-Pathological Importance of miR-146a in Lung Cancer.

Authors:  Javaid Ahmad Wani; Sabhiya Majid; Andleeb Khan; Azher Arafah; Ajaz Ahmad; Basit Latief Jan; Naveed Nazir Shah; Mohsin Kazi; Muneeb U Rehman
Journal:  Diagnostics (Basel)       Date:  2021-02-10

10.  A long noncoding RNA critically regulates Bcr-Abl-mediated cellular transformation by acting as a competitive endogenous RNA.

Authors:  G Guo; Q Kang; X Zhu; Q Chen; X Wang; Y Chen; J Ouyang; L Zhang; H Tan; R Chen; S Huang; J-L Chen
Journal:  Oncogene       Date:  2014-05-19       Impact factor: 9.867

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