Literature DB >> 23916879

Modelling of thrombus growth in flow with a DPD-PDE method.

A Tosenberger1, F Ataullakhanov2, N Bessonov3, M Panteleev2, A Tokarev4, V Volpert5.   

Abstract

Hemostatic plug covering the injury site (or a thrombus in the pathological case) is formed due to the complex interaction of aggregating platelets with biochemical reactions in plasma that participate in blood coagulation. The mechanisms that control clot growth and which lead to growth arrest are not yet completely understood. We model them with numerical simulations based on a hybrid DPD-PDE model. Dissipative particle dynamics (DPD) is used to model plasma flow with platelets while fibrin concentration is described by a simplified reaction-diffusion-advection equation. The model takes into account consecutive stages of clot growth. First, a platelet is weakly connected to the clot and after some time this connection becomes stronger due to other surface receptors involved in platelet adhesion. At the same time, the fibrin mesh is formed inside the clot. This becomes possible because flow does not penetrate the clot and cannot wash out the reactants participating in blood coagulation. Platelets covered by the fibrin mesh cannot attach new platelets. Modelling shows that the growth of a hemostatic plug can stop as a result of its exterior part being removed by the flow thus exposing its non-adhesive core to the flow.
© 2013 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Blood coagulation; Dissipative particle dynamics; Hybrid models; Thrombus growth

Mesh:

Substances:

Year:  2013        PMID: 23916879     DOI: 10.1016/j.jtbi.2013.07.023

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  15 in total

1.  Modelling of platelet-fibrin clot formation in flow with a DPD-PDE method.

Authors:  A Tosenberger; F Ataullakhanov; N Bessonov; M Panteleev; A Tokarev; V Volpert
Journal:  J Math Biol       Date:  2015-05-24       Impact factor: 2.259

2.  Threshold of microvascular occlusion: injury size defines the thrombosis scenario.

Authors:  Aleksey V Belyaev; Mikhail A Panteleev; Fazly I Ataullakhanov
Journal:  Biophys J       Date:  2015-07-21       Impact factor: 4.033

3.  A density-dependent FEM-FCT algorithm with application to modeling platelet aggregation.

Authors:  Nicholas A Danes; Karin Leiderman
Journal:  Int J Numer Method Biomed Eng       Date:  2019-07-09       Impact factor: 2.747

Review 4.  A Systemic Review on the Synthesis, Characterization, and Applications of Palladium Nanoparticles in Biomedicine.

Authors:  Davoodbasha MubarakAli; Hoekun Kim; Perumalsamy Sundara Venkatesh; Jung-Wan Kim; Sang-Yul Lee
Journal:  Appl Biochem Biotechnol       Date:  2022-03-29       Impact factor: 2.926

5.  Review of quantitative systems pharmacological modeling in thrombosis.

Authors:  Limei Cheng; Guo-Wei Wei; Tarek Leil
Journal:  Commun Inf Syst       Date:  2019-12-06

6.  Fluid Mechanics of Blood Clot Formation.

Authors:  Aaron L Fogelson; Keith B Neeves
Journal:  Annu Rev Fluid Mech       Date:  2015-01-01       Impact factor: 18.511

Review 7.  Recent advances in computational modeling of fibrin clot formation: A review.

Authors:  Sumith Yesudasan; Rodney D Averett
Journal:  Comput Biol Chem       Date:  2019-11-10       Impact factor: 2.877

8.  Models of Shear-Induced Platelet Activation and Numerical Implementation With Computational Fluid Dynamics Approaches.

Authors:  Dong Han; Jiafeng Zhang; Bartley P Griffith; Zhongjun J Wu
Journal:  J Biomech Eng       Date:  2022-04-01       Impact factor: 2.097

9.  Modeling Thrombus Shell: Linking Adhesion Receptor Properties and Macroscopic Dynamics.

Authors:  Valeriia N Kaneva; Joanne L Dunster; Vitaly Volpert; Fazoil Ataullahanov; Mikhail A Panteleev; Dmitry Yu Nechipurenko
Journal:  Biophys J       Date:  2021-01-19       Impact factor: 4.033

10.  Computational Study of Thrombus Formation and Clotting Factor Effects under Venous Flow Conditions.

Authors:  Vijay Govindarajan; Vineet Rakesh; Jaques Reifman; Alexander Y Mitrophanov
Journal:  Biophys J       Date:  2016-04-26       Impact factor: 4.033

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