Literature DB >> 23912244

Ratiometric biosensors that measure mitochondrial redox state and ATP in living yeast cells.

Jason D Vevea1, Dana M Alessi Wolken1, Theresa C Swayne2, Adam B White2, Liza A Pon1.   

Abstract

Mitochondria have roles in many cellular processes, from energy metabolism and calcium homeostasis to control of cellular lifespan and programmed cell death. These processes affect and are affected by the redox status of and ATP production by mitochondria. Here, we describe the use of two ratiometric, genetically encoded biosensors that can detect mitochondrial redox state and ATP levels at subcellular resolution in living yeast cells. Mitochondrial redox state is measured using redox-sensitive Green Fluorescent Protein (roGFP) that is targeted to the mitochondrial matrix. Mito-roGFP contains cysteines at positions 147 and 204 of GFP, which undergo reversible and environment-dependent oxidation and reduction, which in turn alter the excitation spectrum of the protein. MitGO-ATeam is a Förster resonance energy transfer (FRET) probe in which the ε subunit of the FoF1-ATP synthase is sandwiched between FRET donor and acceptor fluorescent proteins. Binding of ATP to the ε subunit results in conformation changes in the protein that bring the FRET donor and acceptor in close proximity and allow for fluorescence resonance energy transfer from the donor to acceptor.

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Year:  2013        PMID: 23912244      PMCID: PMC3846110          DOI: 10.3791/50633

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  33 in total

1.  Assay of mitochondrial ATP synthesis in animal cells.

Authors:  G Manfredi; A Spinazzola; N Checcarelli; A Naini
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Authors:  F Q Schafer; G R Buettner
Journal:  Free Radic Biol Med       Date:  2001-06-01       Impact factor: 7.376

3.  A photoactivatable GFP for selective photolabeling of proteins and cells.

Authors:  George H Patterson; Jennifer Lippincott-Schwartz
Journal:  Science       Date:  2002-09-13       Impact factor: 47.728

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5.  Does oxidative damage to DNA increase with age?

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Journal:  Proc Natl Acad Sci U S A       Date:  2001-08-21       Impact factor: 11.205

Review 6.  Mitochondrial free radical generation, oxidative stress, and aging.

Authors:  E Cadenas; K J Davies
Journal:  Free Radic Biol Med       Date:  2000-08       Impact factor: 7.376

7.  Modulation of mitochondrial function by hydrogen peroxide.

Authors:  A C Nulton-Persson; L I Szweda
Journal:  J Biol Chem       Date:  2001-03-30       Impact factor: 5.157

8.  Reversible glutathionylation of complex I increases mitochondrial superoxide formation.

Authors:  Ellen R Taylor; Fiona Hurrell; Richard J Shannon; Tsu-Kung Lin; Judy Hirst; Michael P Murphy
Journal:  J Biol Chem       Date:  2003-03-20       Impact factor: 5.157

9.  Oligomycin and antimycin A prevent nitric oxide-induced apoptosis by blocking cytochrome C leakage.

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Journal:  J Lab Clin Med       Date:  2004-03

10.  Transformation of yeast by lithium acetate/single-stranded carrier DNA/polyethylene glycol method.

Authors:  R Daniel Gietz; Robin A Woods
Journal:  Methods Enzymol       Date:  2002       Impact factor: 1.600

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  15 in total

1.  SDHAF4 promotes mitochondrial succinate dehydrogenase activity and prevents neurodegeneration.

Authors:  Jonathan G Van Vranken; Daniel K Bricker; Noah Dephoure; Steven P Gygi; James E Cox; Carl S Thummel; Jared Rutter
Journal:  Cell Metab       Date:  2014-06-19       Impact factor: 27.287

Review 2.  Role of asymmetric cell division in lifespan control in Saccharomyces cerevisiae.

Authors:  Ryo Higuchi-Sanabria; Wolfgang M A Pernice; Jason D Vevea; Dana M Alessi Wolken; Istvan R Boldogh; Liza A Pon
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3.  Mitochondrial Dysfunction Combined with High Calcium Load Leads to Impaired Antioxidant Defense Underlying the Selective Loss of Nigral Dopaminergic Neurons.

Authors:  Konrad M Ricke; Thomas Paß; Sammy Kimoloi; Kai Fährmann; Christian Jüngst; Astrid Schauss; Olivier R Baris; Marijana Aradjanski; Aleksandra Trifunovic; Therese M Eriksson Faelker; Matteo Bergami; Rudolf J Wiesner
Journal:  J Neurosci       Date:  2020-01-31       Impact factor: 6.167

4.  Role for Lipid Droplet Biogenesis and Microlipophagy in Adaptation to Lipid Imbalance in Yeast.

Authors:  Jason D Vevea; Enrique J Garcia; Robin B Chan; Bowen Zhou; Mei Schultz; Gilbert Di Paolo; J Michael McCaffery; Liza A Pon
Journal:  Dev Cell       Date:  2015-12-07       Impact factor: 12.270

5.  Actin dynamics affect mitochondrial quality control and aging in budding yeast.

Authors:  Ryo Higuchi; Jason D Vevea; Theresa C Swayne; Robert Chojnowski; Vanessa Hill; Istvan R Boldogh; Liza A Pon
Journal:  Curr Biol       Date:  2013-11-21       Impact factor: 10.834

Review 6.  Lipid droplet autophagy during energy mobilization, lipid homeostasis and protein quality control.

Authors:  Enrique J Garcia; Jason D Vevea; Liza A Pon
Journal:  Front Biosci (Landmark Ed)       Date:  2018-03-01

7.  Mitochondria-Associated Degradation Pathway (MAD) Function beyond the Outer Membrane.

Authors:  Pin-Chao Liao; Dana M Alessi Wolken; Edith Serrano; Pallavi Srivastava; Liza A Pon
Journal:  Cell Rep       Date:  2020-07-14       Impact factor: 9.423

Review 8.  Fluorescent proteins as genetically encoded FRET biosensors in life sciences.

Authors:  Bernhard Hochreiter; Alan Pardo Garcia; Johannes A Schmid
Journal:  Sensors (Basel)       Date:  2015-10-16       Impact factor: 3.576

9.  A role for Mfb1p in region-specific anchorage of high-functioning mitochondria and lifespan in Saccharomyces cerevisiae.

Authors:  Wolfgang M Pernice; Jason D Vevea; Liza A Pon
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10.  Isolation of mitochondria from Saccharomyces cerevisiae using magnetic bead affinity purification.

Authors:  Pin-Chao Liao; Istvan R Boldogh; Stephanie E Siegmund; Zachary Freyberg; Liza A Pon
Journal:  PLoS One       Date:  2018-04-26       Impact factor: 3.240

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