Literature DB >> 23908359

X-ray crystallographic evidence for the presence of the cysteine tryptophylquinone cofactor in L-lysine ε-oxidase from Marinomonas mediterranea.

Seiji Okazaki1, Shogo Nakano, Daisuke Matsui, Shusaku Akaji, Kenji Inagaki, Yasuhisa Asano.   

Abstract

We have determined the x-ray crystal structure of L-lysine ε-oxidase from Marinomonas mediterranea in its native and L-lysine-complex forms at 1.94- and 1.99-Å resolution, respectively. In the native enzyme, electron densities clearly indicate the presence of cysteine tryptophylquinone (CTQ) previously identified in quinohemoprotein amine dehydrogenase. In the L-lysine-complex, an electron density corresponding to the bound L-lysine shows that its ε-amino group is attached to the C6 carbonyl group of CTQ, suggesting the formation of a Schiff-base intermediate. Collectively, the present crystal structure provides the first example of an enzyme employing a tryptophylquinone cofactor in an amine oxidase.

Entities:  

Keywords:  CTQ; crystal structure; iodide SAD; l-lysine; oxidative deamination

Mesh:

Substances:

Year:  2013        PMID: 23908359     DOI: 10.1093/jb/mvt070

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  15 in total

1.  Roles of Copper and a Conserved Aspartic Acid in the Autocatalytic Hydroxylation of a Specific Tryptophan Residue during Cysteine Tryptophylquinone Biogenesis.

Authors:  Heather R Williamson; Esha Sehanobish; Alan M Shiller; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Biochemistry       Date:  2017-02-10       Impact factor: 3.162

2.  Kinetic and structural evidence that Asp-678 plays multiple roles in catalysis by the quinoprotein glycine oxidase.

Authors:  Kyle J Mamounis; Dante Avalos; Erik T Yukl; Victor L Davidson
Journal:  J Biol Chem       Date:  2019-10-15       Impact factor: 5.157

3.  Roles of Conserved Residues of the Glycine Oxidase GoxA in Controlling Activity, Cooperativity, Subunit Composition, and Cysteine Tryptophylquinone Biosynthesis.

Authors:  Esha Sehanobish; Heather R Williamson; Victor L Davidson
Journal:  J Biol Chem       Date:  2016-09-16       Impact factor: 5.157

4.  Roles of active site residues in LodA, a cysteine tryptophylquinone dependent ε-lysine oxidase.

Authors:  Esha Sehanobish; María Dolores Chacón-Verdú; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2015-06-03       Impact factor: 4.013

Review 5.  Protein-Derived Cofactors Revisited: Empowering Amino Acid Residues with New Functions.

Authors:  Victor L Davidson
Journal:  Biochemistry       Date:  2018-03-06       Impact factor: 3.162

Review 6.  Diversity of structures, catalytic mechanisms and processes of cofactor biosynthesis of tryptophylquinone-bearing enzymes.

Authors:  Erik T Yukl; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2018-07-17       Impact factor: 4.013

7.  Characterization of PlGoxB, a flavoprotein required for cysteine tryptophylquinone biosynthesis in glycine oxidase from Pseudoalteromonas luteoviolacea.

Authors:  Kyle J Mamounis; Zhongxin Ma; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Arch Biochem Biophys       Date:  2019-09-18       Impact factor: 4.013

8.  Steady-state kinetic mechanism of LodA, a novel cysteine tryptophylquinone-dependent oxidase.

Authors:  Esha Sehanobish; Sooim Shin; Antonio Sanchez-Amat; Victor L Davidson
Journal:  FEBS Lett       Date:  2014-01-23       Impact factor: 4.124

9.  Interaction of GoxA with Its Modifying Enzyme and Its Subunit Assembly Are Dependent on the Extent of Cysteine Tryptophylquinone Biosynthesis.

Authors:  Esha Sehanobish; Jonatan C Campillo-Brocal; Heather R Williamson; Antonio Sanchez-Amat; Victor L Davidson
Journal:  Biochemistry       Date:  2016-04-15       Impact factor: 3.162

10.  Structure and Enzymatic Properties of an Unusual Cysteine Tryptophylquinone-Dependent Glycine Oxidase from Pseudoalteromonas luteoviolacea.

Authors:  Andres Andreo-Vidal; Kyle J Mamounis; Esha Sehanobish; Dante Avalos; Jonatan Cristian Campillo-Brocal; Antonio Sanchez-Amat; Erik T Yukl; Victor L Davidson
Journal:  Biochemistry       Date:  2018-02-06       Impact factor: 3.162

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.