Literature DB >> 23908238

Robustness and compensation of information transmission of signaling pathways.

Shinsuke Uda1, Takeshi H Saito, Takamasa Kudo, Toshiya Kokaji, Takaho Tsuchiya, Hiroyuki Kubota, Yasunori Komori, Yu-ichi Ozaki, Shinya Kuroda.   

Abstract

Robust transmission of information despite the presence of variation is a fundamental problem in cellular functions. However, the capability and characteristics of information transmission in signaling pathways remain poorly understood. We describe robustness and compensation of information transmission of signaling pathways at the cell population level. We calculated the mutual information transmitted through signaling pathways for the growth factor-mediated gene expression. Growth factors appeared to carry only information sufficient for a binary decision. Information transmission was generally more robust than average signal intensity despite pharmacological perturbations, and compensation of information transmission occurred. Information transmission to the biological output of neurite extension appeared robust. Cells may use information entropy as information so that messages can be robustly transmitted despite variation in molecular activities among individual cells.

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Year:  2013        PMID: 23908238     DOI: 10.1126/science.1234511

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  56 in total

1.  Robustness, Accuracy, and Cell State Heterogeneity in Biological Systems.

Authors:  Roy Wollman
Journal:  Curr Opin Syst Biol       Date:  2017-12-15

Review 2.  Information processing in bacteria: memory, computation, and statistical physics: a key issues review.

Authors:  Ganhui Lan; Yuhai Tu
Journal:  Rep Prog Phys       Date:  2016-04-08

3.  Coupled cycling programs multicellular self-organization of neural progenitors.

Authors:  Saba Rezaei-Lotfi; Neil Hunter; Ramin M Farahani
Journal:  Cell Cycle       Date:  2019-07-09       Impact factor: 4.534

4.  Dynamic Sampling and Information Encoding in Biochemical Networks.

Authors:  Garrett D Potter; Tommy A Byrd; Andrew Mugler; Bo Sun
Journal:  Biophys J       Date:  2017-02-28       Impact factor: 4.033

5.  Sensing relative signal in the Tgf-β/Smad pathway.

Authors:  Christopher L Frick; Clare Yarka; Harry Nunns; Lea Goentoro
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-20       Impact factor: 11.205

Review 6.  Cellular noise and information transmission.

Authors:  Andre Levchenko; Ilya Nemenman
Journal:  Curr Opin Biotechnol       Date:  2014-06-09       Impact factor: 9.740

7.  2SBP: overview of the trans-omics session-measure × analyze metabolic adaptation of biological systems-at the 2019 BSJ Meeting in Miyazaki.

Authors:  Mariko Okada; Takeshi Bamba
Journal:  Biophys Rev       Date:  2020-04

Review 8.  Redefining Signaling Pathways with an Expanding Single-Cell Toolbox.

Authors:  Suzanne Gaudet; Kathryn Miller-Jensen
Journal:  Trends Biotechnol       Date:  2016-03-09       Impact factor: 19.536

9.  Light intensity modulates the regulatory network of the shade avoidance response in Arabidopsis.

Authors:  Micha Hersch; Séverine Lorrain; Mieke de Wit; Martine Trevisan; Karin Ljung; Sven Bergmann; Christian Fankhauser
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

10.  Individual Cells Can Resolve Variations in Stimulus Intensity along the IGF-PI3K-AKT Signaling Axis.

Authors:  Sean M Gross; Mark A Dane; Elmar Bucher; Laura M Heiser
Journal:  Cell Syst       Date:  2019-12-11       Impact factor: 10.304

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