Literature DB >> 23900248

Convergence of chromatin binding estimates in live cells.

Davide Mazza, Florian Mueller, Timothy J Stasevich, James G McNally.   

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Year:  2013        PMID： 23900248     DOI： 10.1038/nmeth.2573

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


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  8 in total

1.  Cross-validating FRAP and FCS to quantify the impact of photobleaching on in vivo binding estimates.

Authors:  Timothy J Stasevich; Florian Mueller; Ariel Michelman-Ribeiro; Tilman Rosales; Jay R Knutson; James G McNally
Journal:  Biophys J       Date:  2010-11-03       Impact factor: 4.033

2.  Analysis of binding at a single spatially localized cluster of binding sites by fluorescence recovery after photobleaching.

Authors:  Brian L Sprague; Florian Müller; Robert L Pego; Peter M Bungay; Diana A Stavreva; James G McNally
Journal:  Biophys J       Date:  2006-05-05       Impact factor: 4.033

3.  The DNA binding activity of p53 displays reaction-diffusion kinetics.

Authors:  Peter Hinow; Carl E Rogers; Christopher E Barbieri; Jennifer A Pietenpol; Anne K Kenworthy; Emmanuele DiBenedetto
Journal:  Biophys J       Date:  2006-04-07       Impact factor: 4.033

4.  Analysis of intranuclear binding process of glucocorticoid receptor using fluorescence correlation spectroscopy.

Authors:  Shintaro Mikuni; Mamoru Tamura; Masataka Kinjo
Journal:  FEBS Lett       Date:  2007-01-18       Impact factor: 4.124

5.  Evidence for a common mode of transcription factor interaction with chromatin as revealed by improved quantitative fluorescence recovery after photobleaching.

Authors:  Florian Mueller; Paul Wach; James G McNally
Journal:  Biophys J       Date:  2008-01-16       Impact factor: 4.033

Review 6.  Transcription dynamics.

Authors:  Gordon L Hager; James G McNally; Tom Misteli
Journal:  Mol Cell       Date:  2009-09-24       Impact factor: 17.970

7.  A benchmark for chromatin binding measurements in live cells.

Authors:  Davide Mazza; Alice Abernathy; Nicole Golob; Tatsuya Morisaki; James G McNally
Journal:  Nucleic Acids Res       Date:  2012-07-25       Impact factor: 16.971

8.  Single-molecule imaging of transcription factor binding to DNA in live mammalian cells.

Authors:  J Christof M Gebhardt; David M Suter; Rahul Roy; Ziqing W Zhao; Alec R Chapman; Srinjan Basu; Tom Maniatis; X Sunney Xie
Journal:  Nat Methods       Date:  2013-03-24       Impact factor: 28.547
  8 in total
  7 in total

1.  Reply to "Convergence of chromatin binding estimates in live cells".

Authors:  Ziqing W Zhao; J Christof M Gebhardt; David M Suter; X Sunney Xie
Journal:  Nat Methods       Date:  2013-08       Impact factor: 28.547

Review 2.  Formaldehyde crosslinking: a tool for the study of chromatin complexes.

Authors:  Elizabeth A Hoffman; Brian L Frey; Lloyd M Smith; David T Auble
Journal:  J Biol Chem       Date:  2015-09-09       Impact factor: 5.157

3.  Analysis of chromatin binding dynamics using the crosslinking kinetics (CLK) method.

Authors:  Ramya Viswanathan; Elizabeth A Hoffman; Savera J Shetty; Stefan Bekiranov; David T Auble
Journal:  Methods       Date:  2014-11-01       Impact factor: 3.608

Review 4.  Quantitative imaging of mammalian transcriptional dynamics: from single cells to whole embryos.

Authors:  Ziqing W Zhao; Melanie D White; Stephanie Bissiere; Valeria Levi; Nicolas Plachta
Journal:  BMC Biol       Date:  2016-12-23       Impact factor: 7.431

5.  Live-cell p53 single-molecule binding is modulated by C-terminal acetylation and correlates with transcriptional activity.

Authors:  Alessia Loffreda; Emanuela Jacchetti; Sofia Antunes; Paolo Rainone; Tiziana Daniele; Tatsuya Morisaki; Marco E Bianchi; Carlo Tacchetti; Davide Mazza
Journal:  Nat Commun       Date:  2017-08-22       Impact factor: 14.919

6.  Dynamic Mode Decomposition of Fluorescence Loss in Photobleaching Microscopy Data for Model-Free Analysis of Protein Transport and Aggregation in Living Cells.

Authors:  Daniel Wüstner
Journal:  Sensors (Basel)       Date:  2022-06-23       Impact factor: 3.847

7.  Assaying Homodimers of NF-κB in Live Single Cells.

Authors:  Erik W Martin; Sayantan Chakraborty; Diego M Presman; Francesco Tomassoni Ardori; Kyu-Seon Oh; Mary Kaileh; Lino Tessarollo; Myong-Hee Sung
Journal:  Front Immunol       Date:  2019-11-07       Impact factor: 7.561
  7 in total

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