Literature DB >> 23898935

Ion channel models based on self-assembling cyclic peptide nanotubes.

Javier Montenegro1, M Reza Ghadiri, Juan R Granja.   

Abstract

The lipid bilayer membranes are Nature's dynamic structural motifs that individualize cells and keep ions, proteins, biopolymers and metabolites confined in the appropriate location. The compartmentalization and isolation of these molecules from the external media facilitate the sophisticated functions and connections between the different biological processes accomplished by living organisms. However, cells require assistance from minimal energy shortcuts for the transport of molecules across membranes so that they can interact with the exterior and regulate their internal environments. Ion channels and pores stand out from all other possible transport mechanisms due to their high selectivity and efficiency in discriminating and transporting ions or molecules across membrane barriers. Nevertheless, the complexity of these smart "membrane holes" has driven researchers to develop simpler artificial structures with comparable performance to the natural systems. As a broad range of supramolecular interactions have emerged as efficient tools for the rational design and preparation of stable 3D superstructures, these results have stimulated the creativity of chemists to design synthetic mimics of natural active macromolecules and even to develop artificial structures with functions and properties. In this Account, we highlight results from our laboratories on the construction of artificial ion channel models that exploit the self-assembly of conformationally flat cyclic peptides (CPs) into supramolecular nanotubes. Because of the straightforward synthesis of the cyclic peptide monomers and the complete control over the internal diameter and external surface properties of the resulting hollow tubular suprastructure, CPs are the optimal candidates for the fabrication of ion channels. The ion channel activity and selective transport of small molecules by these structures are examples of the great potential that cyclic peptide nanotubes show for the construction of functional artificial transmembrane transporters. Our experience to date suggests that the next steps for achieving conceptual devices with better performance and selectivity will derive from the topological control over cyclic peptide assembly and the functionalization of the lumen.

Entities:  

Mesh:

Substances:

Year:  2013        PMID: 23898935      PMCID: PMC3867521          DOI: 10.1021/ar400061d

Source DB:  PubMed          Journal:  Acc Chem Res        ISSN: 0001-4842            Impact factor:   22.384


  26 in total

Review 1.  Synthetic ion channels and pores (2004-2005).

Authors:  Adam L Sisson; Muhammad Raza Shah; Sheshanath Bhosale; Stefan Matile
Journal:  Chem Soc Rev       Date:  2006-05-18       Impact factor: 54.564

2.  Alpha,gamma-cyclic peptide ensembles with a hydroxylated cavity.

Authors:  César Reiriz; Manuel Amorín; Rebeca García-Fandiño; Luis Castedo; Juan R Granja
Journal:  Org Biomol Chem       Date:  2009-08-26       Impact factor: 3.876

3.  Theoretical characterization of the dynamical behavior and transport properties of alpha,gamma-peptide nanotubes in solution.

Authors:  Rebeca García-Fandiño; Juan R Granja; Marco D'Abramo; Modesto Orozco
Journal:  J Am Chem Soc       Date:  2009-11-04       Impact factor: 15.419

4.  High-resolution conformation of gramicidin A in a lipid bilayer by solid-state NMR.

Authors:  R R Ketchem; W Hu; T A Cross
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

Review 5.  Ionic selectivity revisited: the role of kinetic and equilibrium processes in ion permeation through channels.

Authors:  G Eisenman; R Horn
Journal:  J Membr Biol       Date:  1983       Impact factor: 1.843

6.  Water permeation across biological membranes: mechanism and dynamics of aquaporin-1 and GlpF.

Authors:  B L de Groot; H Grubmüller
Journal:  Science       Date:  2001-12-14       Impact factor: 47.728

7.  Reversal of charge selectivity in transmembrane protein pores by using noncovalent molecular adapters.

Authors:  L Q Gu; M Dalla Serra; J B Vincent; G Vigh; S Cheley; O Braha; H Bayley
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-11       Impact factor: 11.205

Review 8.  Towards functional bionanomaterials based on self-assembling cyclic peptide nanotubes.

Authors:  Roberto J Brea; César Reiriz; Juan R Granja
Journal:  Chem Soc Rev       Date:  2009-12-22       Impact factor: 54.564

Review 9.  Ionic conductance of synthetic channels: analysis, lessons, and recommendations.

Authors:  Jonathan K W Chui; Thomas M Fyles
Journal:  Chem Soc Rev       Date:  2011-06-21       Impact factor: 54.564

10.  A helical-dipole model describes the single-channel current rectification of an uncharged peptide ion channel.

Authors:  P K Kienker; W F DeGrado; J D Lear
Journal:  Proc Natl Acad Sci U S A       Date:  1994-05-24       Impact factor: 11.205

View more
  25 in total

1.  Fabrication of nanopores with ultrashort single-walled carbon nanotubes inserted in a lipid bilayer.

Authors:  Lei Liu; Jiani Xie; Ting Li; Hai-Chen Wu
Journal:  Nat Protoc       Date:  2015-10-01       Impact factor: 13.491

Review 2.  Building membrane nanopores.

Authors:  Stefan Howorka
Journal:  Nat Nanotechnol       Date:  2017-07-06       Impact factor: 39.213

3.  Controlled membrane translocation provides a mechanism for signal transduction and amplification.

Authors:  Matthew J Langton; Flore Keymeulen; Maria Ciaccia; Nicholas H Williams; Christopher A Hunter
Journal:  Nat Chem       Date:  2016-12-12       Impact factor: 24.427

4.  Rosette Nanotube Porins as Ion Selective Transporters and Single-Molecule Sensors.

Authors:  Prabhat Tripathi; Liang Shuai; Himanshu Joshi; Hirohito Yamazaki; William H Fowle; Aleksei Aksimentiev; Hicham Fenniri; Meni Wanunu
Journal:  J Am Chem Soc       Date:  2020-01-16       Impact factor: 15.419

5.  Cyclization and Self-Assembly of Cyclic Peptides.

Authors:  Alejandro Méndez-Ardoy; Ignacio Insua; Juan R Granja; Javier Montenegro
Journal:  Methods Mol Biol       Date:  2022

Review 6.  Applications of cyclic peptide nanotubes (cPNTs).

Authors:  Wei-Hsien Hsieh; Jiahorng Liaw
Journal:  J Food Drug Anal       Date:  2018-09-28       Impact factor: 6.157

7.  Bio-Inspired Salinity-Gradient Power Generation With UiO-66-NH2 Metal-Organic Framework Based Composite Membrane.

Authors:  Lu Yao; Qi Li; Shangfa Pan; Junmei Cheng; Xueli Liu
Journal:  Front Bioeng Biotechnol       Date:  2022-04-21

8.  Bilayer-spanning DNA nanopores with voltage-switching between open and closed state.

Authors:  Astrid Seifert; Kerstin Göpfrich; Jonathan R Burns; Niels Fertig; Ulrich F Keyser; Stefan Howorka
Journal:  ACS Nano       Date:  2014-12-16       Impact factor: 15.881

9.  Membrane-spanning DNA nanopores with cytotoxic effect.

Authors:  Jonathan R Burns; Noura Al-Juffali; Sam M Janes; Stefan Howorka
Journal:  Angew Chem Int Ed Engl       Date:  2014-10-07       Impact factor: 15.336

10.  A New Methodology for Assessing Macromolecular Click Reactions and Its Application to Amine--Tertiary Isocyanate Coupling for Polymer Ligation.

Authors:  Guillaume Gody; Derrick A Roberts; Thomas Maschmeyer; Sébastien Perrier
Journal:  J Am Chem Soc       Date:  2016-03-21       Impact factor: 15.419

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.