Literature DB >> 23898196

Structural and dynamic studies of the transcription factor ERG reveal DNA binding is allosterically autoinhibited.

Michael C Regan1, Peter S Horanyi, Edward E Pryor, Jessica L Sarver, David S Cafiso, John H Bushweller.   

Abstract

The Ets-Related Gene (ERG) belongs to the Ets family of transcription factors and is critically important for maintenance of the hematopoietic stem cell population. A chromosomal translocation observed in the majority of human prostate cancers leads to the aberrant overexpression of ERG. We have identified regions flanking the ERG Ets domain responsible for autoinhibition of DNA binding and solved crystal structures of uninhibited, autoinhibited, and DNA-bound ERG. NMR-based measurements of backbone dynamics show that uninhibited ERG undergoes substantial dynamics on the millisecond-to-microsecond timescale but autoinhibited and DNA-bound ERG do not. We propose a mechanism whereby the allosteric basis of ERG autoinhibition is mediated predominantly by the regulation of Ets-domain dynamics with only modest structural changes.

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Year:  2013        PMID: 23898196      PMCID: PMC3746864          DOI: 10.1073/pnas.1301726110

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  38 in total

1.  DNA binding specificity studies of four ETS proteins support an indirect read-out mechanism of protein-DNA recognition.

Authors:  B R Szymczyna; C H Arrowsmith
Journal:  J Biol Chem       Date:  2000-09-15       Impact factor: 5.157

2.  An effective method for the discrimination of motional anisotropy and chemical exchange.

Authors:  Julie M Kneller; Min Lu; Clay Bracken
Journal:  J Am Chem Soc       Date:  2002-03-06       Impact factor: 15.419

3.  Solution structure of the ets domain of Fli-1 when bound to DNA.

Authors:  H Liang; X Mao; E T Olejniczak; D G Nettesheim; L Yu; R P Meadows; C B Thompson; S W Fesik
Journal:  Nat Struct Biol       Date:  1994-12

4.  DNA binding by the ETS protein TEL (ETV6) is regulated by autoinhibition and self-association.

Authors:  Sean M Green; H Jerome Coyne; Lawrence P McIntosh; Barbara J Graves
Journal:  J Biol Chem       Date:  2010-04-16       Impact factor: 5.157

5.  Overcoming expression and purification problems of RhoGDI using a family of "parallel" expression vectors.

Authors:  P Sheffield; S Garrard; Z Derewenda
Journal:  Protein Expr Purif       Date:  1999-02       Impact factor: 1.650

6.  Trisomy of Erg is required for myeloproliferation in a mouse model of Down syndrome.

Authors:  Ashley P Ng; Craig D Hyland; Donald Metcalf; Catherine L Carmichael; Stephen J Loughran; Ladina Di Rago; Benjamin T Kile; Warren S Alexander
Journal:  Blood       Date:  2009-12-09       Impact factor: 22.113

7.  TMPRSS2-ERG and PTEN loss in prostate cancer.

Authors:  Jeremy A Squire
Journal:  Nat Genet       Date:  2009-05       Impact factor: 38.330

Review 8.  Genetics of myeloid leukemias.

Authors:  Louise M Kelly; D Gary Gilliland
Journal:  Annu Rev Genomics Hum Genet       Date:  2002-04-15       Impact factor: 8.929

9.  PU.1 can recruit BCL6 to DNA to repress gene expression in germinal center B cells.

Authors:  Fang Wei; Kristina Zaprazna; Junwen Wang; Michael L Atchison
Journal:  Mol Cell Biol       Date:  2009-06-29       Impact factor: 4.272

10.  Structural modeling and DNA binding autoinhibition analysis of Ergp55, a critical transcription factor in prostate cancer.

Authors:  Shanti P Gangwar; Sharmistha Dey; Ajay K Saxena
Journal:  PLoS One       Date:  2012-06-28       Impact factor: 3.240

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  30 in total

1.  ERF mutations reveal a balance of ETS factors controlling prostate oncogenesis.

Authors:  Rohit Bose; Wouter R Karthaus; Joshua Armenia; Wassim Abida; Phillip J Iaquinta; Zeda Zhang; John Wongvipat; Elizabeth V Wasmuth; Neel Shah; Patrick S Sullivan; Michael G Doran; Ping Wang; Anna Patruno; Yilin Zhao; Deyou Zheng; Nikolaus Schultz; Charles L Sawyers
Journal:  Nature       Date:  2017-06-14       Impact factor: 49.962

2.  Synergy of aromatic residues and phosphoserines within the intrinsically disordered DNA-binding inhibitory elements of the Ets-1 transcription factor.

Authors:  Geneviève Desjardins; Charles A Meeker; Niraja Bhachech; Simon L Currie; Mark Okon; Barbara J Graves; Lawrence P McIntosh
Journal:  Proc Natl Acad Sci U S A       Date:  2014-07-14       Impact factor: 11.205

3.  Autoinhibitory mechanisms of ERG studied by molecular dynamics simulations.

Authors:  Yan Lu; Freddie R Salsbury
Journal:  AIP Adv       Date:  2015-01-22       Impact factor: 1.548

4.  Allosteric Autoinhibition Pathway in Transcription Factor ERG: Dynamics Network and Mutant Experimental Evaluations.

Authors:  Wei Ye; Tianle Qian; Hao Liu; Ray Luo; Hai-Feng Chen
Journal:  J Chem Inf Model       Date:  2017-04-25       Impact factor: 4.956

5.  Autoinhibition of ETV6 DNA Binding Is Established by the Stability of Its Inhibitory Helix.

Authors:  Soumya De; Mark Okon; Barbara J Graves; Lawrence P McIntosh
Journal:  J Mol Biol       Date:  2016-02-23       Impact factor: 5.469

6.  Steric mechanism of auto-inhibitory regulation of specific and non-specific DNA binding by the ETS transcriptional repressor ETV6.

Authors:  Soumya De; Anson C K Chan; H Jerome Coyne; Niraja Bhachech; Ulrike Hermsdorf; Mark Okon; Michael E P Murphy; Barbara J Graves; Lawrence P McIntosh
Journal:  J Mol Biol       Date:  2013-12-12       Impact factor: 5.469

7.  Electrostatic repulsion causes anticooperative DNA binding between tumor suppressor ETS transcription factors and JUN-FOS at composite DNA sites.

Authors:  Bethany J Madison; Kathleen A Clark; Niraja Bhachech; Peter C Hollenhorst; Barbara J Graves; Simon L Currie
Journal:  J Biol Chem       Date:  2018-10-12       Impact factor: 5.157

8.  Structured and disordered regions cooperatively mediate DNA-binding autoinhibition of ETS factors ETV1, ETV4 and ETV5.

Authors:  Simon L Currie; Desmond K W Lau; Jedediah J Doane; Frank G Whitby; Mark Okon; Lawrence P McIntosh; Barbara J Graves
Journal:  Nucleic Acids Res       Date:  2017-03-17       Impact factor: 16.971

Review 9.  The oncogene ERG: a key factor in prostate cancer.

Authors:  P Adamo; M R Ladomery
Journal:  Oncogene       Date:  2015-04-27       Impact factor: 9.867

10.  The human CRY1 tail controls circadian timing by regulating its association with CLOCK:BMAL1.

Authors:  Gian Carlo G Parico; Ivette Perez; Jennifer L Fribourgh; Britney N Hernandez; Hsiau-Wei Lee; Carrie L Partch
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-26       Impact factor: 11.205

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