Literature DB >> 2388824

Distortions induced in double-stranded oligonucleotides by the binding of cis- or trans-diammine-dichloroplatinum(II) to the d(GTG) sequence.

M F Anin1, M Leng.   

Abstract

Conformational changes induced in double-stranded oligonucleotides by the binding of trans- or cis-diamminedichloro platinum(II) to the d(GTG) sequence have been characterized by means of melting temperatures, electrophoretic migrations in non-denaturing polyacrylamide gels, reactivities with the artificial nuclease Phenanthroline-copper and with chemical probes. The cis-platinum adduct behaves more as a centre of directed bend than as a hinge joint, the induced bend angle being of the order of 25-30 degrees. The double helix is locally denatured over 2 base pairs (corresponding to the platinated 5'G residue and the central T residue) and is distorted over 4-5 base pairs. The trans-platinum adduct behaves also more as a centre of directed bend than as a hinge joint, the induced bend angle being of the order of 60 degrees. The double helix is locally denatured over 4 base pairs (corresponding to the immediately 5'T residue adjacent to the adduct and to the three base residues of the adduct). Both the cis- and trans-platinum adducts decrease the thermal stability of the double helix.

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Year:  1990        PMID: 2388824      PMCID: PMC331256          DOI: 10.1093/nar/18.15.4395

Source DB:  PubMed          Journal:  Nucleic Acids Res        ISSN: 0305-1048            Impact factor:   16.971


  28 in total

1.  Chemical probes of the conformation of DNA modified by cis-diamminedichloroplatinum(II).

Authors:  L Marrot; M Leng
Journal:  Biochemistry       Date:  1989-02-21       Impact factor: 3.162

2.  Sequence-dependent variability of DNA structure. Influence of flanking sequences and fragment length on digestion by conformationally sensitive nucleases.

Authors:  C Yoon; M D Kuwabara; R Law; R Wall; D S Sigman
Journal:  J Biol Chem       Date:  1988-06-15       Impact factor: 5.157

3.  Binding of the antitumor drug platinum uracil blue to closed and nicked circular duplex DNAs.

Authors:  W Bauer; S L Gonias; S K Kam; K C Wu; S J Lippard
Journal:  Biochemistry       Date:  1978-03-21       Impact factor: 3.162

4.  Synthesis and characterization of trans-[Pt(NH3)2Cl2] adducts of d(CCTCGAGTCTCC).d(GGAGACTCGAGG).

Authors:  C A Lepre; L Chassot; C E Costello; S J Lippard
Journal:  Biochemistry       Date:  1990-01-23       Impact factor: 3.162

5.  Conformation of DNA modified at a d(GG) or a d(AG) site by the antitumor drug cis-diamminedichloroplatinum(II).

Authors:  A Schwartz; L Marrot; M Leng
Journal:  Biochemistry       Date:  1989-10-03       Impact factor: 3.162

6.  Chloroacetaldehyde reacts with Z-DNA.

Authors:  N Vogt; L Marrot; N Rousseau; B Malfoy; M Leng
Journal:  J Mol Biol       Date:  1988-06-20       Impact factor: 5.469

7.  Sequence specificity of mutation induced by the anti-tumor drug cisplatin in the CHO aprt gene.

Authors:  J G de Boer; B W Glickman
Journal:  Carcinogenesis       Date:  1989-08       Impact factor: 4.944

8.  Structure of the intrastrand cis-[Pt(NH3)2(d(GpCpG))] adduct in a dodecanucleotide duplex: II. A molecular mechanics modeling study.

Authors:  K Mazeau; F Vovelle; A Rahmouni; M Leng; M Ptak
Journal:  Anticancer Drug Des       Date:  1989-06

9.  Structure of the intrastrand cis-[Pt(NH3)2(d(GpCpG))] adduct in a dodecanucleotide duplex: I. A 1H and 31P n.m.r. study.

Authors:  M Ptak; A Rahmouni; K Mazeau; N T Thuong; M Leng
Journal:  Anticancer Drug Des       Date:  1989-06

10.  The major adduct of the antitumor drug cis-diamminedichloroplatinum(II) with DNA bends the duplex by approximately equal to 40 degrees toward the major groove.

Authors:  J A Rice; D M Crothers; A L Pinto; S J Lippard
Journal:  Proc Natl Acad Sci U S A       Date:  1988-06       Impact factor: 11.205

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  15 in total

1.  Ordered conformational changes in damaged DNA induced by nucleotide excision repair factors.

Authors:  Angels Tapias; Jerome Auriol; Diane Forget; Jacqueline H Enzlin; Orlando D Schärer; Frederic Coin; Benoit Coulombe; Jean-Marc Egly
Journal:  J Biol Chem       Date:  2004-02-23       Impact factor: 5.157

2.  Pre-steady-state binding of damaged DNA by XPC-hHR23B reveals a kinetic mechanism for damage discrimination.

Authors:  Kelly S Trego; John J Turchi
Journal:  Biochemistry       Date:  2006-02-14       Impact factor: 3.162

3.  Base-pair opening and spermine binding--B-DNA features displayed in the crystal structure of a gal operon fragment: implications for protein-DNA recognition.

Authors:  L W Tari; A S Secco
Journal:  Nucleic Acids Res       Date:  1995-06-11       Impact factor: 16.971

4.  Open complex formation around a lesion during nucleotide excision repair provides a structure for cleavage by human XPG protein.

Authors:  E Evans; J Fellows; A Coffer; R D Wood
Journal:  EMBO J       Date:  1997-02-03       Impact factor: 11.598

5.  Mechanism of open complex and dual incision formation by human nucleotide excision repair factors.

Authors:  E Evans; J G Moggs; J R Hwang; J M Egly; R D Wood
Journal:  EMBO J       Date:  1997-11-03       Impact factor: 11.598

6.  Mutagenic and genotoxic effects of DNA adducts formed by the anticancer drug cis-diamminedichloroplatinum(II).

Authors:  K J Yarema; S J Lippard; J M Essigmann
Journal:  Nucleic Acids Res       Date:  1995-10-25       Impact factor: 16.971

7.  Transplatin-conjugated triplex-forming oligonucleotides form adducts with both strands of DNA.

Authors:  Meghan A Campbell; Paul S Miller
Journal:  Bioconjug Chem       Date:  2009-12       Impact factor: 4.774

8.  Cross-linking to an interrupted polypurine sequence with a platinum-modified triplex-forming oligonucleotide.

Authors:  Meghan A Campbell; Paul S Miller
Journal:  J Biol Inorg Chem       Date:  2009-04-07       Impact factor: 3.358

9.  DNA double helix promotes a linkage isomerization reaction in trans-diamminedichloroplatinum(II)-modified DNA.

Authors:  R Dalbiès; D Payet; M Leng
Journal:  Proc Natl Acad Sci U S A       Date:  1994-08-16       Impact factor: 11.205

10.  Base sequence-independent distorsions induced by interstrand cross-links in cis-diamminedichloroplatinum (II)-modified DNA.

Authors:  J M Malinge; C Pérez; M Leng
Journal:  Nucleic Acids Res       Date:  1994-09-25       Impact factor: 16.971

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