Literature DB >> 23883101

Insensitivity of tryptophan fluorescence to local charge mutations.

J Nathan Scott1, Patrik R Callis.   

Abstract

The steady state fluorescence spectral maximum (λmax) for tryptophan 140 of Staphylococcal nuclease remains virtually unchanged when nearby charged groups are removed by mutation, even though large electrostatic effects on λmax might be expected. To help understand the underlying mechanism of this curious result, we have modeled λmax with three sets of 50-ns molecular dynamics simulations in explicit water, equilibrated with excited state and with ground state charges. Semiempirical quantum mechanics and independent electrostatic analysis for the wild-type protein and four charge-altering mutants were performed on the chromophore using the coordinates from the simulations. Electrostatic contributions from the nearby charged lysines by themselves contribute 30-90 nm red shifts relative to the gas phase, but in each case, contributions from water create compensating blue shifts that bring the predicted λmax within 2 nm of the experimental value, 332 ± 0.5 nm for all five proteins. Although long-range collective interactions from ordered water make large blue shifts, crucial for determining the steady state λmax for absorption and fluorescence, such blue shifts do not contribute to the amplitude of the time dependent Stokes shift following excitation, which comes from nearby charges and only ∼6 waters tightly networked with those charges. We therefore conclude that for STNase, water and protein effects on the Stokes shift are not separable.

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Year:  2013        PMID: 23883101     DOI: 10.1021/jp4041716

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  5 in total

1.  Picosecond fluorescence dynamics of tryptophan and 5-fluorotryptophan in monellin: slow water-protein relaxation unmasked.

Authors:  Jianhua Xu; Binbin Chen; Patrik Callis; Pedro L Muiño; Henriëtte Rozeboom; Jaap Broos; Dmitri Toptygin; Ludwig Brand; Jay R Knutson
Journal:  J Phys Chem B       Date:  2015-03-04       Impact factor: 2.991

2.  To unravel the connection between the non-equilibrium and equilibrium solvation dynamics of tryptophan: success and failure of the linear response theory of fluorescence Stokes shift.

Authors:  Xiaofang Wang; Jirui Guo; Tanping Li; Zhiyi Wei
Journal:  RSC Adv       Date:  2020-05-13       Impact factor: 4.036

3.  Charge invariant protein-water relaxation in GB1 via ultrafast tryptophan fluorescence.

Authors:  Arianna Biesso; Jianhua Xu; Pedro L Muíño; Patrik R Callis; Jay R Knutson
Journal:  J Am Chem Soc       Date:  2014-02-06       Impact factor: 15.419

4.  Deciphering the molecular mechanism responsible for GCaMP6m's Ca2+-dependent change in fluorescence.

Authors:  Lauren M Barnett; Thomas E Hughes; Mikhail Drobizhev
Journal:  PLoS One       Date:  2017-02-09       Impact factor: 3.240

5.  Structure and stability of recombinant bovine odorant-binding protein: I. Design and analysis of monomeric mutants.

Authors:  Olga V Stepanenko; Denis O Roginskii; Olesya V Stepanenko; Irina M Kuznetsova; Vladimir N Uversky; Konstantin K Turoverov
Journal:  PeerJ       Date:  2016-04-18       Impact factor: 2.984

  5 in total

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