Literature DB >> 23878001

Ultrafast NMR T1 relaxation measurements: probing molecular properties in real time.

Pieter E S Smith1, Kevin J Donovan, Or Szekely, Maria Baias, Lucio Frydman.   

Abstract

The longitudinal relaxation properties of NMR active nuclei carry useful information about the site-specific chemical environments and about the mobility of molecular fragments. Molecular mobility is in turn a key parameter reporting both on stable properties, such as size, as well as on dynamic ones, such as transient interactions and irreversible aggregation. In order to fully investigate the latter, a fast sampling of the relaxation parameters of transiently formed molecular species may be needed. Nevertheless, the acquisition of longitudinal relaxation data is typically slow, being limited by the requirement that the time for which the nucleus relaxes be varied incrementally until a complete build-up curve is generated. Recently, a number of single-shot-inversion-recovery methods have been developed capable of alleviating this need; still, these may be challenged by either spectral resolution restrictions or when coping with very fast relaxing nuclei. Here, we present a new experiment to measure the T1s of multiple nuclear spins that experience fast longitudinal relaxation, while retaining full high-resolution chemical shift information. Good agreement is observed between T1s measured with conventional means and T1s measured using the new technique. The method is applied to the real-time investigation of the reaction between D-xylose and sodium borate, which is in turn elucidated with the aid of ancillary ultrafast and conventional 2D TOCSY measurements.
Copyright © 2013 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  T1; longitudinal relaxation; molecular mobility; real-time NMR; ultrafast 2D NMR

Year:  2013        PMID: 23878001      PMCID: PMC5040487          DOI: 10.1002/cphc.201300436

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  28 in total

1.  The 'dynamics' in the thermodynamics of binding.

Authors:  J D Forman-Kay
Journal:  Nat Struct Biol       Date:  1999-12

2.  Model-free analysis of a thermophilic Fe(7)S(8) protein compared with a mesophilic Fe(4)S(4) protein.

Authors:  I Bertini; C Luchinat; Y Niikura; C Presenti
Journal:  Proteins       Date:  2000-10-01

3.  Computer-Guided Design in Molecular Recognition: Design and Synthesis of a Glucopyranose Receptor This work was supported by the National Institutes of Health (grant DK5523402).

Authors:  Wei Yang; Huan He; Dale G. Drueckhammer
Journal:  Angew Chem Int Ed Engl       Date:  2001-05-04       Impact factor: 15.336

Review 4.  Protein dynamics from NMR.

Authors:  R Ishima; D A Torchia
Journal:  Nat Struct Biol       Date:  2000-09

5.  Determination of the rotational diffusion tensor of macromolecules in solution from nmr relaxation data with a combination of exact and approximate methods--application to the determination of interdomain orientation in multidomain proteins.

Authors:  R Ghose; D Fushman; D Cowburn
Journal:  J Magn Reson       Date:  2001-04       Impact factor: 2.229

6.  Practical implementation and optimization of one-shot T1 imaging.

Authors:  I Kay; R M Henkelman
Journal:  Magn Reson Med       Date:  1991-12       Impact factor: 4.668

7.  Contributions to conformational entropy arising from bond vector fluctuations measured from NMR-derived order parameters: application to protein folding.

Authors:  D Yang; L E Kay
Journal:  J Mol Biol       Date:  1996-10-25       Impact factor: 5.469

8.  Inhomogeneity correction using an estimated linear field map.

Authors:  P Irarrazabal; C H Meyer; D G Nishimura; A Macovski
Journal:  Magn Reson Med       Date:  1996-02       Impact factor: 4.668

9.  Insights into the local residual entropy of proteins provided by NMR relaxation.

Authors:  Z Li; S Raychaudhuri; A J Wand
Journal:  Protein Sci       Date:  1996-12       Impact factor: 6.725

10.  First successful molecular design of an artificial Lewis oligosaccharide binding system utilizing positive homotropic allosterism.

Authors:  A Sugasaki; K Sugiyasu; M Ikeda; M Takeuchi; S Shinkai
Journal:  J Am Chem Soc       Date:  2001-10-24       Impact factor: 15.419

View more
  9 in total

1.  Spatially selective heteronuclear multiple-quantum coherence spectroscopy for biomolecular NMR studies.

Authors:  Bharathwaj Sathyamoorthy; David M Parish; Gaetano T Montelione; Rong Xiao; Thomas Szyperski
Journal:  Chemphyschem       Date:  2014-04-30       Impact factor: 3.102

2.  Reducing acquisition times in multidimensional NMR with a time-optimized Fourier encoding algorithm.

Authors:  Zhiyong Zhang; Pieter E S Smith; Lucio Frydman
Journal:  J Chem Phys       Date:  2014-11-21       Impact factor: 3.488

3.  Identification of Intracellular and Extracellular Metabolites in Cancer Cells Using 13C Hyperpolarized Ultrafast Laplace NMR.

Authors:  Guannan Zhang; Susanna Ahola; Mathilde H Lerche; Ville-Veikko Telkki; Christian Hilty
Journal:  Anal Chem       Date:  2018-09-06       Impact factor: 6.986

4.  Probing molecular dynamics with hyperpolarized ultrafast Laplace NMR using a low-field, single-sided magnet.

Authors:  Jared N King; Alfredo Fallorina; Justin Yu; Guannan Zhang; Ville-Veikko Telkki; Christian Hilty; Tyler Meldrum
Journal:  Chem Sci       Date:  2018-06-28       Impact factor: 9.825

5.  Ultrafast diffusion exchange nuclear magnetic resonance.

Authors:  Otto Mankinen; Vladimir V Zhivonitko; Anne Selent; Sarah Mailhiot; Sanna Komulainen; Nønne L Prisle; Susanna Ahola; Ville-Veikko Telkki
Journal:  Nat Commun       Date:  2020-06-26       Impact factor: 14.919

6.  Untuned broadband spiral micro-coils achieve sensitive multi-nuclear NMR TX/RX from microfluidic samples.

Authors:  Hossein Davoodi; Nurdiana Nordin; Hirokazu Munakata; Jan G Korvink; Neil MacKinnon; Vlad Badilita
Journal:  Sci Rep       Date:  2021-04-08       Impact factor: 4.379

Review 7.  Ultrafast 2D NMR: an emerging tool in analytical spectroscopy.

Authors:  Patrick Giraudeau; Lucio Frydman
Journal:  Annu Rev Anal Chem (Palo Alto Calif)       Date:  2014       Impact factor: 10.745

8.  Suppression of problematic compound oligomerization by cosolubilization of nondetergent sulfobetaines.

Authors:  Yumiko Mizukoshi; Koh Takeuchi; Misa Arutaki; Takeshi Takizawa; Hiroyuki Hanzawa; Hideo Takahashi; Ichio Shimada
Journal:  ChemMedChem       Date:  2015-03-11       Impact factor: 3.466

9.  Ultrafast multidimensional Laplace NMR for a rapid and sensitive chemical analysis.

Authors:  Susanna Ahola; Vladimir V Zhivonitko; Otto Mankinen; Guannan Zhang; Anu M Kantola; Hsueh-Ying Chen; Christian Hilty; Igor V Koptyug; Ville-Veikko Telkki
Journal:  Nat Commun       Date:  2015-09-18       Impact factor: 14.919

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.