Literature DB >> 23872454

pH-rate profiles support a general base mechanism for galactokinase (Lactococcus lactis).

Laurie A Reinhardt1, James B Thoden, Greg S Peters, Hazel M Holden, W W Cleland.   

Abstract

Galactokinase (GALK), a member the Leloir pathway for normal galactose metabolism, catalyzes the conversion of α-d-galactose to galactose-1-phosphate. For this investigation, we studied the kinetic mechanism and pH profiles of the enzyme from Lactococcus lactis. Our results show that the mechanism for its reaction is sequential in both directions. Mutant proteins D183A and D183N are inactive (< 10000 fold), supporting the role of Asp183 as a catalytic base that deprotonates the C-1 hydroxyl group of galactose. The pH-kcat profile of the forward reaction has a pKa of 6.9 ± 0.2 that likely is due to Asp183. The pH-k(cat)/K(Gal) profile of the reverse reaction further substantiates this role as it is lacking a key pKa required for a direct proton transfer mechanism. The R36A and R36N mutant proteins show over 100-fold lower activity than that for the wild-type enzyme, thus suggesting that Arg36 lowers the pKa of the C-1 hydroxyl to facilitate deprotonation.
Copyright © 2013 Federation of European Biochemical Societies. Published by Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Galactokinase; General base; Kinetics; Mechanism; pH-rate profile

Mesh:

Substances:

Year:  2013        PMID: 23872454      PMCID: PMC3786675          DOI: 10.1016/j.febslet.2013.07.017

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  29 in total

Review 1.  Structure and function of enzymes of the Leloir pathway for galactose metabolism.

Authors:  Hazel M Holden; Ivan Rayment; James B Thoden
Journal:  J Biol Chem       Date:  2003-08-15       Impact factor: 5.157

2.  The pathway of the adaptive fermentation of galactose by yeast.

Authors:  J F Wilkinson
Journal:  Biochem J       Date:  1949       Impact factor: 3.857

3.  The enzymatic transformation of galactose into glucose derivatives.

Authors:  R CAPUTTO; L R LELOIR
Journal:  J Biol Chem       Date:  1949-05       Impact factor: 5.157

4.  Structure of the Methanococcus jannaschii mevalonate kinase, a member of the GHMP kinase superfamily.

Authors:  Dong Yang; Lance W Shipman; Charles A Roessner; A Ian Scott; James C Sacchettini
Journal:  J Biol Chem       Date:  2001-12-19       Impact factor: 5.157

5.  Statistical analysis of enzyme kinetic data.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1979       Impact factor: 1.600

Review 6.  Galactokinase: structure, function and role in type II galactosemia.

Authors:  H M Holden; J B Thoden; D J Timson; R J Reece
Journal:  Cell Mol Life Sci       Date:  2004-10       Impact factor: 9.261

7.  Molecular and biochemical characterization of human galactokinase and its small molecule inhibitors.

Authors:  M Tang; K Wierenga; L J Elsas; K Lai
Journal:  Chem Biol Interact       Date:  2010-08-07       Impact factor: 5.192

8.  X-ray structures of the myosin motor domain of Dictyostelium discoideum complexed with MgADP.BeFx and MgADP.AlF4-.

Authors:  A J Fisher; C A Smith; J B Thoden; R Smith; K Sutoh; H M Holden; I Rayment
Journal:  Biochemistry       Date:  1995-07-18       Impact factor: 3.162

9.  Kinetic analysis of yeast galactokinase: implications for transcriptional activation of the GAL genes.

Authors:  David J Timson; Richard J Reece
Journal:  Biochimie       Date:  2002-04       Impact factor: 4.079

10.  Studies on the substrate specificity of Escherichia coli galactokinase.

Authors:  Jie Yang; Xun Fu; Qiang Jia; Jie Shen; John B Biggins; Jiqing Jiang; Jingjing Zhao; Joshua J Schmidt; Peng G Wang; Jon S Thorson
Journal:  Org Lett       Date:  2003-06-26       Impact factor: 6.005

View more
  1 in total

1.  pH-Rate profiles establish that polyketide synthase dehydratase domains utilize a single-base mechanism.

Authors:  Xinqiang Xie; David E Cane
Journal:  Org Biomol Chem       Date:  2018-12-05       Impact factor: 3.876

  1 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.