Literature DB >> 12106903

Kinetic analysis of yeast galactokinase: implications for transcriptional activation of the GAL genes.

David J Timson1, Richard J Reece.   

Abstract

Galactokinase (EC 2.7.1.6) catalyses the first step in the catabolism of galactose. Yeast galactokinase, Gal1p, and the closely related but catalytically inactive Gal3p, also function as ligand sensors in the GAL genetic switch. In the presence of galactose and ATP (the substrates of the reaction catalysed by Gal1p) Gal1p or Gal3p can bind to Gal80p, a transcriptional repressor. This relieves the inhibition of a transcriptional activator, Gal4p, and permits expression of the GAL genes. In order to learn more about the mechanism of ligand sensing by Gal3p and Gal1p, we studied the kinetics of the reaction catalysed by Gal1p. Galactose-1-phosphate, a product of the reaction, is a mixed inhibitor both with respect to galactose and to ATP suggesting that the reaction proceeds via a compulsory, ordered, ternary complex mechanism. There is little variation in either the turnover number or the specificity constants in the pH range 6.0-9.5, implying that no catalytic base is required in the reaction. These data are discussed both in the context of galactokinase enzymology and their implications for the mechanism of transcriptional induction.

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Year:  2002        PMID: 12106903     DOI: 10.1016/s0300-9084(02)01399-8

Source DB:  PubMed          Journal:  Biochimie        ISSN: 0300-9084            Impact factor:   4.079


  12 in total

1.  Molecular simulation and docking studies of Gal1p and Gal3p proteins in the presence and absence of ligands ATP and galactose: implication for transcriptional activation of GAL genes.

Authors:  Sanjay K Upadhyay; Yellamraju U Sasidhar
Journal:  J Comput Aided Mol Des       Date:  2012-05-26       Impact factor: 3.686

2.  Is the regulation of galactose 1-phosphate tuned against gene expression noise?

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Journal:  Biochem J       Date:  2005-04-01       Impact factor: 3.857

3.  Crystal structures of Staphylococcus epidermidis mevalonate diphosphate decarboxylase bound to inhibitory analogs reveal new insight into substrate binding and catalysis.

Authors:  Michael L Barta; D Andrew Skaff; William J McWhorter; Timothy J Herdendorf; Henry M Miziorko; Brian V Geisbrecht
Journal:  J Biol Chem       Date:  2011-05-11       Impact factor: 5.157

4.  Mutational hypersensitivity of a gene regulatory protein: Saccharomyces cerevisiae Gal80p.

Authors:  Karsten Melcher
Journal:  Genetics       Date:  2005-07-05       Impact factor: 4.562

5.  Structure-Based Optimization of Small Molecule Human Galactokinase Inhibitors.

Authors:  Li Liu; Manshu Tang; Rajan Pragani; Frank G Whitby; Ya-Qin Zhang; Bijina Balakrishnan; Yuhong Fang; Surendra Karavadhi; Dingyin Tao; Christopher A LeClair; Matthew D Hall; Juan J Marugan; Matthew Boxer; Min Shen; Christopher P Hill; Kent Lai; Samarjit Patnaik
Journal:  J Med Chem       Date:  2021-09-07       Impact factor: 7.446

6.  Localization and interaction of the proteins constituting the GAL genetic switch in Saccharomyces cerevisiae.

Authors:  Raymond Wightman; Rachel Bell; Richard J Reece
Journal:  Eukaryot Cell       Date:  2008-10-24

Review 7.  Regulations of sugar transporters: insights from yeast.

Authors:  J Horák
Journal:  Curr Genet       Date:  2013-03-01       Impact factor: 3.886

8.  pH-rate profiles support a general base mechanism for galactokinase (Lactococcus lactis).

Authors:  Laurie A Reinhardt; James B Thoden; Greg S Peters; Hazel M Holden; W W Cleland
Journal:  FEBS Lett       Date:  2013-07-19       Impact factor: 4.124

9.  Kinetic and functional analysis of L-threonine kinase, the PduX enzyme of Salmonella enterica.

Authors:  Chenguang Fan; Herbert J Fromm; Thomas A Bobik
Journal:  J Biol Chem       Date:  2009-06-09       Impact factor: 5.157

10.  Gene network requirements for regulation of metabolic gene expression to a desired state.

Authors:  Jan Berkhout; Bas Teusink; Frank J Bruggeman
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

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