Literature DB >> 23871958

Suggested phylogeny of tRNAs based on the construction of ancestral sequences.

Sávio Torres de Farias1.   

Abstract

The origin and evolution of life on the planet is one of the most intriguing challenges in life sciences and, for some researchers, it is centered in the origin of the genetic code. Many hypotheses about the origin and evolution of tRNA have been proposed and in this work a new suggestion is proposed based on the reconstruction of tRNA ancestor sequences. Ancestral sequences of 22 types of tRNA molecules were built by maximum likelihood from 9758 sequences currently reported from different organisms. Phylogenetic analysis showed that the main force for evolutionary diversification of tRNA molecules was a change in the second base of the anticodon. The data revealed that diversification is not correlated with the characteristic of the specified amino acid, indicating that the correlation between tRNA and amino acid was given indirectly, and possibly should have been mediated by proto-aminoacyl-tRNA synthetases.
© 2013 Elsevier Ltd. All rights reserved.

Keywords:  Genetic code; Origin of life; tRNA evolution

Mesh:

Substances:

Year:  2013        PMID: 23871958     DOI: 10.1016/j.jtbi.2013.06.033

Source DB:  PubMed          Journal:  J Theor Biol        ISSN: 0022-5193            Impact factor:   2.691


  7 in total

1.  Essentials in the life process indicated by the self-referential genetic code.

Authors:  Romeu Cardoso Guimarães
Journal:  Orig Life Evol Biosph       Date:  2015-01-14       Impact factor: 1.950

2.  Origin of the 16S Ribosomal Molecule from Ancestor tRNAs.

Authors:  Savio Torres de Farias; Thais Gaudêncio Rêgo; Marco V José
Journal:  J Mol Evol       Date:  2021-03-24       Impact factor: 2.395

3.  Evolution of initiator tRNAs and selection of methionine as the initiating amino acid.

Authors:  Souvik Bhattacharyya; Umesh Varshney
Journal:  RNA Biol       Date:  2016-06-20       Impact factor: 4.652

4.  The natural history of transfer RNA and its interactions with the ribosome.

Authors:  Gustavo Caetano-Anollés; Feng-Jie Sun
Journal:  Front Genet       Date:  2014-05-09       Impact factor: 4.599

5.  Origin and evolution of the Peptidyl Transferase Center from proto-tRNAs.

Authors:  Sávio T Farias; Thais G Rêgo; Marco V José
Journal:  FEBS Open Bio       Date:  2014-02-08       Impact factor: 2.693

6.  Evolution of transfer RNA and the origin of the translation system.

Authors:  Savio T de Farias; Thaís G do Rêgo; Marco V José
Journal:  Front Genet       Date:  2014-08-28       Impact factor: 4.599

7.  Origin and Evolution of RNA-Dependent RNA Polymerase.

Authors:  Savio T de Farias; Ariosvaldo P Dos Santos Junior; Thais G Rêgo; Marco V José
Journal:  Front Genet       Date:  2017-09-20       Impact factor: 4.599

  7 in total

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