Literature DB >> 23868391

Solution structure of the N-terminal domain of a replication restart primosome factor, PriC, in Escherichia coli.

Takahiko Aramaki1, Yoshito Abe, Tsutomu Katayama, Tadashi Ueda.   

Abstract

In eubacterial organisms, the oriC-independent primosome plays an essential role in replication restart after the dissociation of the replication DNA-protein complex by DNA damage. PriC is a key protein component in the replication restart primosome. Our recent study suggested that PriC is divided into two domains: an N-terminal and a C-terminal domain. In the present study, we determined the solution structure of the N-terminal domain, whose structure and function have remained unknown until now. The revealed structure was composed of three helices and one extended loop. We also observed chemical shift changes in the heteronuclear NMR spectrum and oligomerization in the presence of ssDNA. These abilities may contribute to the PriC-ssDNA complex, which is important for the replication restart primosome.
Copyright © 2013 The Protein Society.

Entities:  

Keywords:  NMR; PriC; primosome; protein structure; protein-DNA interaction; replication restart

Mesh:

Substances:

Year:  2013        PMID: 23868391      PMCID: PMC3776339          DOI: 10.1002/pro.2314

Source DB:  PubMed          Journal:  Protein Sci        ISSN: 0961-8368            Impact factor:   6.725


  21 in total

1.  The importance of repairing stalled replication forks.

Authors:  M M Cox; M F Goodman; K N Kreuzer; D J Sherratt; S J Sandler; K J Marians
Journal:  Nature       Date:  2000-03-02       Impact factor: 49.962

2.  Multiple genetic pathways for restarting DNA replication forks in Escherichia coli K-12.

Authors:  S J Sandler
Journal:  Genetics       Date:  2000-06       Impact factor: 4.562

3.  dnaC mutations suppress defects in DNA replication- and recombination-associated functions in priB and priC double mutants in Escherichia coli K-12.

Authors:  S J Sandler; K J Marians; K H Zavitz; J Coutu; M A Parent; A J Clark
Journal:  Mol Microbiol       Date:  1999-10       Impact factor: 3.501

4.  PriA mutations that affect PriA-PriC function during replication restart.

Authors:  S J Sandler; J D McCool; T T Do; R U Johansen
Journal:  Mol Microbiol       Date:  2001-08       Impact factor: 3.501

Review 5.  Nucleic acid recognition by OB-fold proteins.

Authors:  Douglas L Theobald; Rachel M Mitton-Fry; Deborah S Wuttke
Journal:  Annu Rev Biophys Biomol Struct       Date:  2003-02-18

6.  Refinement of protein structures in explicit solvent.

Authors:  Jens P Linge; Mark A Williams; Christian A E M Spronk; Alexandre M J J Bonvin; Michael Nilges
Journal:  Proteins       Date:  2003-02-15

7.  WebLogo: a sequence logo generator.

Authors:  Gavin E Crooks; Gary Hon; John-Marc Chandonia; Steven E Brenner
Journal:  Genome Res       Date:  2004-06       Impact factor: 9.043

8.  Automated NMR structure calculation with CYANA.

Authors:  Peter Güntert
Journal:  Methods Mol Biol       Date:  2004

9.  Domain separation and characterization of PriC, a replication restart primosome factor in Escherichia coli.

Authors:  Takahiko Aramaki; Yoshito Abe; Takatoshi Ohkuri; Tomonori Mishima; Shoji Yamashita; Tsutomu Katayama; Tadashi Ueda
Journal:  Genes Cells       Date:  2013-07-02       Impact factor: 1.891

10.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

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  3 in total

1.  Structure and Function of the PriC DNA Replication Restart Protein.

Authors:  Sarah R Wessel; Claudia C Cornilescu; Gabriel Cornilescu; Alice Metz; Maxime Leroux; Kaifeng Hu; Steven J Sandler; John L Markley; James L Keck
Journal:  J Biol Chem       Date:  2016-07-05       Impact factor: 5.157

2.  Regulation of E. coli Rep helicase activity by PriC.

Authors:  Binh Nguyen; Min Kyung Shinn; Elizabeth Weiland; Timothy M Lohman
Journal:  J Mol Biol       Date:  2021-06-01       Impact factor: 6.151

Review 3.  Mechanisms of bacterial DNA replication restart.

Authors:  Tricia A Windgassen; Sarah R Wessel; Basudeb Bhattacharyya; James L Keck
Journal:  Nucleic Acids Res       Date:  2018-01-25       Impact factor: 16.971

  3 in total

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