| Literature DB >> 23866265 |
Xing-Wei Liang1, Xiang-Shun Cui, Shao-Chen Sun, Yong-Xun Jin, Young Tae Heo, Suk Namgoong, Nam-Hyung Kim.
Abstract
BACKGROUND: Series of epigenetic events happen during preimplantation development. Therefore assistant reproduction techniques (ART) have the potential to disrupt epigenetic regulation during embryo development. The purpose of this study was to investigate whether defects in methylation patterns in blastocyst due to superovulation originate from abnormal expression of Dnmts.Entities:
Mesh:
Substances:
Year: 2013 PMID: 23866265 PMCID: PMC3723434 DOI: 10.1186/1477-7827-11-69
Source DB: PubMed Journal: Reprod Biol Endocrinol ISSN: 1477-7827 Impact factor: 5.211
qRT-PCR and BS primers
| Dnmt1o | F: 5′-GGTTGATTGAGGGTCATT-3′ | [ | |
| R: 5′-GCAGGAATTCATGCAGTAAG-3′ | |||
| | Dnmt3a | F: 5′-GCCGAATTGTGTCTTGGTGGATGACA-3′ | [ |
| R: 5′-CCTGGTGGAATGCACTGCAGAAGGA-3′ | |||
| | Dnmt3b | F: 5′-TTCAGTGACCAGTCCTCAGACACGAA-3′ | [ |
| R: 5′-TCAGAAGGCTGGAGACCTCCCTCTT-3′ | |||
| | Dnmt3L | F: 5′-GTGCGGGTACTGAGCCTTTTTAGA-3′ | [ |
| R: 5′-CGACATTTGTGACATCTTCCACGTA-3′ | |||
| | Atp5b | F: 5′-GGCCAAGATGTCCTGCTGTT-3′ | [ |
| R: 5′-GCTGGTAGCCTACAGCAGAAGG-3′ | |||
| | Gapdh | F: 5′-GCCGGGGCTGGCATTGCT-3′ | |
| R: 5′-TTGCTCAGTGTCCTTGCTGGGG-3′ | |||
| IAP LRT | F1: 5′-TTGATAGTTGTGTTTTAAGTGGTAAATAAA-3′ | [ | |
| R1: 5′-AAAACACCACAAACCAAAATCTTCTAC-3′ | |||
| | | F2: 5′-TTGTGTTTTAAGTGGTAAATAAATAATTTG-3′ | |
| R2: 5′-CAAAAAAAACACACAAACCAAAAT-3′ | |||
| | Line1 5′ | F1: 5′-GTTAGAGAATTTGATAGTTTTTGGAATAGG-3′ | [ |
| R1: 5′-CCAAAACAAAACCTTTCTCAAACACTATAT-3′ | |||
| F2: 5′-TAGGAAATTAGTTTGAATAGGTGAGAGGT-3′ | |||
| R2: 5′-TCAAACACTATATTACTTTAACAATTCCCA-3′ |
Figure 1Distribution patterns of global DNA methylation (A) and methylation at histone H3K9 (B) in pronucleus-stage mouse zygotes. The zygotes were stained with 5mC-specific antibody (green) and counterstained with DAPI (red), or stained for H3K9 dimethylation (green) and counterstained with Hoechst 33342 (blue). MP-/FP + indicates absence of a signal in male pronuclei and presence of a signal in female pronuclei; MP-/FP- indicates that both pronuclei had a very weak signal or lacked a signal; and MP+/FP + indicates both pronuclei had a signal. The polar body (Pb) was always positively stained. MP: male pronucleus; FP: female pronucleus; (+) positive signal; (−) negative or weak signal.
DNA methylation profiles in zygotes derived from control and superovulated females
| MP-/FP+ | 76 (89%) | 63 (94%) | |
| | MP-/FP- | 4 | 0 |
| | MP+/FP+ | 5 | 4 |
| | Total | 85 | 67 |
| MP-/FP+ | 107 (94%) | 108 (93%) | |
| | MP-/FP- | 0 | 2 |
| | MP+/FP+ | 7 | 6 |
| | Total | 114 | 116 |
| MP-/FP+ | 104 (89%) | 103 (92%) | |
| | MP-/FP- | 5 | 6 |
| | MP+/FP+ | 8 | 3 |
| Total | 117 | 112 |
Figure 2IAP and Line1 DNA methylation profiles in blastocysts. Sodium bisulfite sequencing was used to examine the DNA methylation patterns of (A) IAP LTR and (B) Line1 5′ end sequences in blastocyst DNA. Blastocysts were obtained from control, low- and high-dose hormone treatment groups. Target sequences were amplified, cloned and sequenced. Open circles, unmethylated CpGs; black circles, methylated CpGs; gray circles, not analyzable/mutated CpG site. Each row represents an individual sequenced clone. Only black and white circles were analyzed. The percentage of methylated CpGs (black circles/(black + white circles)) is indicated.
Figure 3Expression of Dnmts in MII oocytes derived from control and superovulated females. qRT-PCR was applied to evaluate the mRNA abundance of A) Dnmt1o, B) Dnmt3a, C) Dnmt3b and D) Dnmt3L in MII oocytes derived from control, low- (6 IU) and high-dose hormone treatment groups, respectively. Two reference genes, Gapdh and Atp5, were used for each sample. Data were normalized to the average levels of the two reference genes. The fold change was calculated using the comparative CT method. Data are presented as mean ± SD.
Figure 4Expression of Dnmts in zygotes derived from control and superovulated females. qRT-PCR was applied to evaluate the mRNA abundance of A) Dnmt1o, B) Dnmt3a, C) Dnmt3b and D) Dnmt3L in zygotes derived from control, low- (6 IU) and high-dose hormone treatment groups, respectively. Data were normalized to the average levels of Gapdh and Atp5 for each sample. The fold change was calculated using the comparative CT method. Data are presented as mean ± SD.