Literature DB >> 23864653

Molecular basis of glycosaminoglycan heparin binding to the chemokine CXCL1 dimer.

Krishna Mohan Poluri1, Prem Raj B Joseph, Kirti V Sawant, Krishna Rajarathnam.   

Abstract

Glycosaminoglycan (GAG)-bound and soluble chemokine gradients in the vasculature and extracellular matrix mediate neutrophil recruitment to the site of microbial infection and sterile injury in the host tissue. However, the molecular principles by which chemokine-GAG interactions orchestrate these gradients are poorly understood. This, in part, can be directly attributed to the complex interrelationship between the chemokine monomer-dimer equilibrium and binding geometry and affinities that are also intimately linked to GAG length. To address some of this missing knowledge, we have characterized the structural basis of heparin binding to the murine CXCL1 dimer. CXCL1 is a neutrophil-activating chemokine and exists as both monomers and dimers (Kd = 36 μm). To avoid interference from monomer-GAG interactions, we designed a trapped dimer (dCXCL1) by introducing a disulfide bridge across the dimer interface. We characterized the binding of GAG heparin octasaccharide to dCXCL1 using solution NMR spectroscopy. Our studies show that octasaccharide binds orthogonally to the interhelical axis and spans the dimer interface and that heparin binding enhances the structural integrity of the C-terminal helical residues and stability of the dimer. We generated a quadruple mutant (H20A/K22A/K62A/K66A) on the basis of the binding data and observed that this mutant failed to bind heparin octasaccharide, validating our structural model. We propose that the stability enhancement of dimers upon GAG binding regulates in vivo neutrophil trafficking by increasing the lifetime of "active" chemokines, and that this structural knowledge could be exploited for designing inhibitors that disrupt chemokine-GAG interactions and neutrophil homing to the target tissue.

Entities:  

Keywords:  Chemokines; Glycobiology; Glycosaminoglycan; Heparin; NMR; Neutrophil

Mesh:

Substances:

Year:  2013        PMID: 23864653      PMCID: PMC3757178          DOI: 10.1074/jbc.M113.492579

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  63 in total

Review 1.  The molecular basis and functional implications of chemokine interactions with heparan sulphate.

Authors:  Hugues Lortat-Jacob
Journal:  Curr Opin Struct Biol       Date:  2009-09-30       Impact factor: 6.809

2.  13C NMR chemical shifts can predict disulfide bond formation.

Authors:  D Sharma; K Rajarathnam
Journal:  J Biomol NMR       Date:  2000-10       Impact factor: 2.835

3.  NMRPipe: a multidimensional spectral processing system based on UNIX pipes.

Authors:  F Delaglio; S Grzesiek; G W Vuister; G Zhu; J Pfeifer; A Bax
Journal:  J Biomol NMR       Date:  1995-11       Impact factor: 2.835

4.  Glycosaminoglycans mediate cell surface oligomerization of chemokines.

Authors:  A J Hoogewerf; G S Kuschert; A E Proudfoot; F Borlat; I Clark-Lewis; C A Power; T N Wells
Journal:  Biochemistry       Date:  1997-11-04       Impact factor: 3.162

5.  Use of neutrons reveals the dynamics of cell surface glycosaminoglycans.

Authors:  Marion Jasnin
Journal:  Methods Mol Biol       Date:  2012

Review 6.  The structural elucidation of glycosaminoglycans.

Authors:  Vikas Prabhakar; Ishan Capila; Ram Sasisekharan
Journal:  Methods Mol Biol       Date:  2009

7.  Backbone dynamics of a free and phosphopeptide-complexed Src homology 2 domain studied by 15N NMR relaxation.

Authors:  N A Farrow; R Muhandiram; A U Singer; S M Pascal; C M Kay; G Gish; S E Shoelson; T Pawson; J D Forman-Kay; L E Kay
Journal:  Biochemistry       Date:  1994-05-17       Impact factor: 3.162

8.  Touch of chemokines.

Authors:  Xavier Blanchet; Marcella Langer; Christian Weber; Rory R Koenen; Philipp von Hundelshausen
Journal:  Front Immunol       Date:  2012-07-12       Impact factor: 7.561

9.  The novel CXCL12gamma isoform encodes an unstructured cationic domain which regulates bioactivity and interaction with both glycosaminoglycans and CXCR4.

Authors:  Cédric Laguri; Rabia Sadir; Patricia Rueda; Françoise Baleux; Pierre Gans; Fernando Arenzana-Seisdedos; Hugues Lortat-Jacob
Journal:  PLoS One       Date:  2007-10-31       Impact factor: 3.240

10.  CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data.

Authors:  David S Wishart; David Arndt; Mark Berjanskii; Peter Tang; Jianjun Zhou; Guohui Lin
Journal:  Nucleic Acids Res       Date:  2008-05-30       Impact factor: 16.971

View more
  26 in total

1.  Heparin octasaccharide decoy liposomes inhibit replication of multiple viruses.

Authors:  Jennifer P Wang; Robert W Finberg; Gabriel L Hendricks; Lourdes Velazquez; Serena Pham; Natasha Qaisar; James C Delaney; Karthik Viswanathan; Leila Albers; James C Comolli; Zachary Shriver; David M Knipe; Evelyn A Kurt-Jones; Deborah K Fygenson; Jose M Trevejo
Journal:  Antiviral Res       Date:  2015-01-28       Impact factor: 5.970

2.  Molecular Basis of Chemokine CXCL5-Glycosaminoglycan Interactions.

Authors:  Krishna Mohan Sepuru; Balaji Nagarajan; Umesh R Desai; Krishna Rajarathnam
Journal:  J Biol Chem       Date:  2016-07-28       Impact factor: 5.157

Review 3.  The Role of Heparan Sulfate in Inflammation, and the Development of Biomimetics as Anti-Inflammatory Strategies.

Authors:  Brooke L Farrugia; Megan S Lord; James Melrose; John M Whitelock
Journal:  J Histochem Cytochem       Date:  2018-01-01       Impact factor: 2.479

Review 4.  Glycosaminoglycan Interactions Fine-Tune Chemokine-Mediated Neutrophil Trafficking: Structural Insights and Molecular Mechanisms.

Authors:  Krishna Rajarathnam; Krishna Mohan Sepuru; Prem Raj B Joseph; Kirti V Sawant; Aaron J Brown
Journal:  J Histochem Cytochem       Date:  2018-01-01       Impact factor: 2.479

5.  CXCL1/MGSA Is a Novel Glycosaminoglycan (GAG)-binding Chemokine: STRUCTURAL EVIDENCE FOR TWO DISTINCT NON-OVERLAPPING BINDING DOMAINS.

Authors:  Krishna Mohan Sepuru; Krishna Rajarathnam
Journal:  J Biol Chem       Date:  2015-12-31       Impact factor: 5.157

6.  Interleukin-37 monomer is the active form for reducing innate immunity.

Authors:  Elan Z Eisenmesser; Adrian Gottschlich; Jasmina S Redzic; Natasia Paukovich; Jay C Nix; Tania Azam; Lingdi Zhang; Rui Zhao; Jeffrey S Kieft; Erlinda The; Xianzhong Meng; Charles A Dinarello
Journal:  Proc Natl Acad Sci U S A       Date:  2019-02-28       Impact factor: 11.205

7.  Multiple glycosaminoglycan-binding epitopes of monocyte chemoattractant protein-3/CCL7 enable it to function as a non-oligomerizing chemokine.

Authors:  Catherina L Salanga; Douglas P Dyer; Janna G Kiselar; Sayan Gupta; Mark R Chance; Tracy M Handel
Journal:  J Biol Chem       Date:  2014-04-11       Impact factor: 5.157

Review 8.  Mechanistic and therapeutic overview of glycosaminoglycans: the unsung heroes of biomolecular signaling.

Authors:  Khushboo Gulati; Krishna Mohan Poluri
Journal:  Glycoconj J       Date:  2015-12-03       Impact factor: 2.916

9.  Structural basis, stoichiometry, and thermodynamics of binding of the chemokines KC and MIP2 to the glycosaminoglycan heparin.

Authors:  Krishna Mohan Sepuru; Balaji Nagarajan; Umesh R Desai; Krishna Rajarathnam
Journal:  J Biol Chem       Date:  2018-09-26       Impact factor: 5.157

10.  Unique properties of human β-defensin 6 (hBD6) and glycosaminoglycan complex: sandwich-like dimerization and competition with the chemokine receptor 2 (CCR2) binding site.

Authors:  Viviane S De Paula; Vitor H Pomin; Ana Paula Valente
Journal:  J Biol Chem       Date:  2014-06-26       Impact factor: 5.157

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.