Literature DB >> 23864168

From connectivity models to region labels: identifying foci of a neurological disorder.

Archana Venkataraman, Marek Kubicki, Polina Golland.   

Abstract

We propose a novel approach to identify the foci of a neurological disorder based on anatomical and functional connectivity information. Specifically, we formulate a generative model that characterizes the network of abnormal functional connectivity emanating from the affected foci. This allows us to aggregate pairwise connectivity changes into a region-based representation of the disease. We employ the variational expectation-maximization algorithm to fit the model and subsequently identify both the afflicted regions and the differences in connectivity induced by the disorder. We demonstrate our method on a population study of schizophrenia.

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Year:  2013        PMID: 23864168      PMCID: PMC4278385          DOI: 10.1109/TMI.2013.2272976

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  36 in total

1.  An investigation of functional and anatomical connectivity using magnetic resonance imaging.

Authors:  Martin A Koch; David G Norris; Margret Hund-Georgiadis
Journal:  Neuroimage       Date:  2002-05       Impact factor: 6.556

Review 2.  Advances in functional and structural MR image analysis and implementation as FSL.

Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

Review 3.  Unrest at rest: default activity and spontaneous network correlations.

Authors:  Randy L Buckner; Justin L Vincent
Journal:  Neuroimage       Date:  2007-01-25       Impact factor: 6.556

4.  Resting-state functional connectivity reflects structural connectivity in the default mode network.

Authors:  Michael D Greicius; Kaustubh Supekar; Vinod Menon; Robert F Dougherty
Journal:  Cereb Cortex       Date:  2008-04-09       Impact factor: 5.357

5.  Resting-state functional connectivity in major depression: abnormally increased contributions from subgenual cingulate cortex and thalamus.

Authors:  Michael D Greicius; Benjamin H Flores; Vinod Menon; Gary H Glover; Hugh B Solvason; Heather Kenna; Allan L Reiss; Alan F Schatzberg
Journal:  Biol Psychiatry       Date:  2007-01-08       Impact factor: 13.382

6.  Robust Feature Selection in Resting-State fMRI Connectivity Based on Population Studies.

Authors:  Archana Venkataraman; Marek Kubicki; Carl-Fredrik Westin; Polina Golland
Journal:  Conf Comput Vis Pattern Recognit Workshops       Date:  2010

7.  Aberrant "default mode" functional connectivity in schizophrenia.

Authors:  Abigail G Garrity; Godfrey D Pearlson; Kristen McKiernan; Dan Lloyd; Kent A Kiehl; Vince D Calhoun
Journal:  Am J Psychiatry       Date:  2007-03       Impact factor: 18.112

Review 8.  Schizophrenia, "Just the Facts": what we know in 2008 part 1: overview.

Authors:  Rajiv Tandon; Matcheri S Keshavan; Henry A Nasrallah
Journal:  Schizophr Res       Date:  2008-03       Impact factor: 4.939

9.  Structural disconnectivity in schizophrenia: a diffusion tensor magnetic resonance imaging study.

Authors:  J Burns; D Job; M E Bastin; H Whalley; T Macgillivray; E C Johnstone; S M Lawrie
Journal:  Br J Psychiatry       Date:  2003-05       Impact factor: 9.319

Review 10.  Schizophrenia: a disconnection syndrome?

Authors:  K J Friston; C D Frith
Journal:  Clin Neurosci       Date:  1995
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  7 in total

1.  Identifying disease foci from static and dynamic effective connectivity networks: Illustration in soldiers with trauma.

Authors:  D Rangaprakash; Michael N Dretsch; Archana Venkataraman; Jeffrey S Katz; Thomas S Denney; Gopikrishna Deshpande
Journal:  Hum Brain Mapp       Date:  2017-10-23       Impact factor: 5.038

2.  Pivotal response treatment prompts a functional rewiring of the brain among individuals with autism spectrum disorder.

Authors:  Archana Venkataraman; Daniel Y-J Yang; Nicha Dvornek; Lawrence H Staib; James S Duncan; Kevin A Pelphrey; Pamela Ventola
Journal:  Neuroreport       Date:  2016-09-28       Impact factor: 1.837

3.  Bayesian Community Detection in the Space of Group-Level Functional Differences.

Authors:  Archana Venkataraman; Daniel Y-J Yang; Kevin A Pelphrey; James S Duncan
Journal:  IEEE Trans Med Imaging       Date:  2016-03-02       Impact factor: 10.048

4.  Joint hub identification for brain networks by multivariate graph inference.

Authors:  Defu Yang; Xiaofeng Zhu; Chenggang Yan; Ziwen Peng; Maria Bagonis; Paul J Laurienti; Martin Styner; Guorong Wu
Journal:  Med Image Anal       Date:  2021-07-07       Impact factor: 13.828

5.  An unbiased Bayesian approach to functional connectomics implicates social-communication networks in autism.

Authors:  Archana Venkataraman; James S Duncan; Daniel Y-J Yang; Kevin A Pelphrey
Journal:  Neuroimage Clin       Date:  2015-05-01       Impact factor: 4.881

6.  Neuropsychiatric disease classification using functional connectomics - results of the connectomics in neuroimaging transfer learning challenge.

Authors:  Markus D Schirmer; Archana Venkataraman; Islem Rekik; Minjeong Kim; Stewart H Mostofsky; Mary Beth Nebel; Keri Rosch; Karen Seymour; Deana Crocetti; Hassna Irzan; Michael Hütel; Sebastien Ourselin; Neil Marlow; Andrew Melbourne; Egor Levchenko; Shuo Zhou; Mwiza Kunda; Haiping Lu; Nicha C Dvornek; Juntang Zhuang; Gideon Pinto; Sandip Samal; Jennings Zhang; Jorge L Bernal-Rusiel; Rudolph Pienaar; Ai Wern Chung
Journal:  Med Image Anal       Date:  2021-01-28       Impact factor: 13.828

7.  Investigating Focal Connectivity Deficits in Alzheimer's Disease Using Directional Brain Networks Derived from Resting-State fMRI.

Authors:  Sinan Zhao; D Rangaprakash; Archana Venkataraman; Peipeng Liang; Gopikrishna Deshpande
Journal:  Front Aging Neurosci       Date:  2017-07-06       Impact factor: 5.750

  7 in total

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