Literature DB >> 21660131

Robust Feature Selection in Resting-State fMRI Connectivity Based on Population Studies.

Archana Venkataraman1, Marek Kubicki, Carl-Fredrik Westin, Polina Golland.   

Abstract

We propose an alternative to univariate statistics for identifying population differences in functional connectivity. Our feature selection method is based on a procedure that searches across subsets of the data to isolate a set of robust, predictive functional connections. The metric, known as the Gini Importance, also summarizes multivariate patterns of interaction, which cannot be captured by univariate techniques. We compare the Gini Importance with univariate statistical tests to evaluate functional connectivity changes induced by schizophrenia. Our empirical results indicate that univariate features vary dramatically across subsets of the data and have little classification power. In contrast, relevant features based on Gini Importance are considerably more stable and allow us to accurately predict the diagnosis of a test subject.

Entities:  

Year:  2010        PMID: 21660131      PMCID: PMC3110085          DOI: 10.1109/CVPRW.2010.5543446

Source DB:  PubMed          Journal:  Conf Comput Vis Pattern Recognit Workshops        ISSN: 2160-7508


  16 in total

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Authors:  Stephen M Smith; Mark Jenkinson; Mark W Woolrich; Christian F Beckmann; Timothy E J Behrens; Heidi Johansen-Berg; Peter R Bannister; Marilena De Luca; Ivana Drobnjak; David E Flitney; Rami K Niazy; James Saunders; John Vickers; Yongyue Zhang; Nicola De Stefano; J Michael Brady; Paul M Matthews
Journal:  Neuroimage       Date:  2004       Impact factor: 6.556

2.  Sequence-independent segmentation of magnetic resonance images.

Authors:  Bruce Fischl; David H Salat; André J W van der Kouwe; Nikos Makris; Florent Ségonne; Brian T Quinn; Anders M Dale
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Review 3.  Unrest at rest: default activity and spontaneous network correlations.

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Review 4.  Spontaneous fluctuations in brain activity observed with functional magnetic resonance imaging.

Authors:  Michael D Fox; Marcus E Raichle
Journal:  Nat Rev Neurosci       Date:  2007-09       Impact factor: 34.870

5.  Resting-state functional connectivity in major depression: abnormally increased contributions from subgenual cingulate cortex and thalamus.

Authors:  Michael D Greicius; Benjamin H Flores; Vinod Menon; Gary H Glover; Hugh B Solvason; Heather Kenna; Allan L Reiss; Alan F Schatzberg
Journal:  Biol Psychiatry       Date:  2007-01-08       Impact factor: 13.382

Review 6.  A review of MRI findings in schizophrenia.

Authors:  M E Shenton; C C Dickey; M Frumin; R W McCarley
Journal:  Schizophr Res       Date:  2001-04-15       Impact factor: 4.939

Review 7.  Schizophrenia, "Just the Facts": what we know in 2008 part 1: overview.

Authors:  Rajiv Tandon; Matcheri S Keshavan; Henry A Nasrallah
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Review 8.  Schizophrenia: a disconnection syndrome?

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Journal:  Neuroimage       Date:  2006-02-09       Impact factor: 6.556

10.  A method for functional network connectivity among spatially independent resting-state components in schizophrenia.

Authors:  Madiha J Jafri; Godfrey D Pearlson; Michael Stevens; Vince D Calhoun
Journal:  Neuroimage       Date:  2007-11-13       Impact factor: 6.556

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  11 in total

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3.  Whole brain resting state functional connectivity abnormalities in schizophrenia.

Authors:  Archana Venkataraman; Thomas J Whitford; Carl-Fredrik Westin; Polina Golland; Marek Kubicki
Journal:  Schizophr Res       Date:  2012-05-26       Impact factor: 4.939

4.  Discriminative sparse connectivity patterns for classification of fMRI Data.

Authors:  Harini Eavani; Theodore D Satterthwaite; Raquel E Gur; Ruben C Gur; Christos Davatzikos
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6.  From brain connectivity models to identifying foci of a neurological disorder.

Authors:  Archana Venkataraman; Marek Kubicki; Polina Golland
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7.  From connectivity models to region labels: identifying foci of a neurological disorder.

Authors:  Archana Venkataraman; Marek Kubicki; Polina Golland
Journal:  IEEE Trans Med Imaging       Date:  2013-07-10       Impact factor: 10.048

8.  Clinical applications of the functional connectome.

Authors:  F Xavier Castellanos; Adriana Di Martino; R Cameron Craddock; Ashesh D Mehta; Michael P Milham
Journal:  Neuroimage       Date:  2013-04-28       Impact factor: 6.556

9.  Combining Multiple Resting-State fMRI Features during Classification: Optimized Frameworks and Their Application to Nicotine Addiction.

Authors:  Xiaoyu Ding; Yihong Yang; Elliot A Stein; Thomas J Ross
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10.  Functional Connectivity Alterations in Epilepsy from Resting-State Functional MRI.

Authors:  Kashif Rajpoot; Atif Riaz; Waqas Majeed; Nasir Rajpoot
Journal:  PLoS One       Date:  2015-08-07       Impact factor: 3.240

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