Literature DB >> 23862923

The application of the thermodynamic perturbation theory to study the hydrophobic hydration.

Tomaz Mohoric1, Tomaz Urbic, Barbara Hribar-Lee.   

Abstract

The thermodynamic perturbation theory was tested against newly obtained Monte Carlo computer simulations to describe the major features of the hydrophobic effect in a simple 3D-Mercedes-Benz water model: the temperature and hydrophobe size dependence on entropy, enthalpy, and free energy of transfer of a simple hydrophobic solute into water. An excellent agreement was obtained between the theoretical and simulation results. Further, the thermodynamic perturbation theory qualitatively correctly (with respect to the experimental data) describes the solvation thermodynamics under conditions where the simulation results are difficult to obtain with good enough accuracy, e.g., at high pressures.

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Year:  2013        PMID: 23862923      PMCID: PMC3724728          DOI: 10.1063/1.4812744

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  7 in total

Review 1.  Dominant forces in protein folding.

Authors:  K A Dill
Journal:  Biochemistry       Date:  1990-08-07       Impact factor: 3.162

Review 2.  Interfaces and the driving force of hydrophobic assembly.

Authors:  David Chandler
Journal:  Nature       Date:  2005-09-29       Impact factor: 49.962

3.  Hydrophobic hydration from small to large lengthscales: Understanding and manipulating the crossover.

Authors:  Sowmianarayanan Rajamani; Thomas M Truskett; Shekhar Garde
Journal:  Proc Natl Acad Sci U S A       Date:  2005-06-22       Impact factor: 11.205

4.  Pressure and temperature dependence of hydrophobic hydration: volumetric, compressibility, and thermodynamic signatures.

Authors:  Maria Sabaye Moghaddam; Hue Sun Chan
Journal:  J Chem Phys       Date:  2007-03-21       Impact factor: 3.488

5.  Three-dimensional "Mercedes-Benz" model for water.

Authors:  Cristiano L Dias; Tapio Ala-Nissila; Martin Grant; Mikko Karttunen
Journal:  J Chem Phys       Date:  2009-08-07       Impact factor: 3.488

6.  Theory for the three-dimensional Mercedes-Benz model of water.

Authors:  Alan Bizjak; Tomaz Urbic; Vojko Vlachy; Ken A Dill
Journal:  J Chem Phys       Date:  2009-11-21       Impact factor: 3.488

7.  Hydrophobicity within the three-dimensional Mercedes-Benz model: potential of mean force.

Authors:  Cristiano L Dias; Teemu Hynninen; Tapio Ala-Nissila; Adam S Foster; Mikko Karttunen
Journal:  J Chem Phys       Date:  2011-02-14       Impact factor: 3.488

  7 in total
  3 in total

1.  The application of the integral equation theory to study the hydrophobic interaction.

Authors:  Tomaž Mohorič; Tomaz Urbic; Barbara Hribar-Lee
Journal:  J Chem Phys       Date:  2014-01-14       Impact factor: 3.488

2.  Determination of partial molar volumes from free energy perturbation theory.

Authors:  Jonah Z Vilseck; Julian Tirado-Rives; William L Jorgensen
Journal:  Phys Chem Chem Phys       Date:  2015-01-15       Impact factor: 3.676

3.  Analytical theory of the hydrophobic effect of solutes in water.

Authors:  Tomaz Urbic; Ken A Dill
Journal:  Phys Rev E       Date:  2017-09-01       Impact factor: 2.529

  3 in total

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