Literature DB >> 23858484

A framework for assessing frequency domain causality in physiological time series with instantaneous effects.

Luca Faes1, Silvia Erla, Alberto Porta, Giandomenico Nollo.   

Abstract

We present an approach for the quantification of directional relations in multiple time series exhibiting significant zero-lag interactions. To overcome the limitations of the traditional multivariate autoregressive (MVAR) modelling of multiple series, we introduce an extended MVAR (eMVAR) framework allowing either exclusive consideration of time-lagged effects according to the classic notion of Granger causality, or consideration of combined instantaneous and lagged effects according to an extended causality definition. The spectral representation of the eMVAR model is exploited to derive novel frequency domain causality measures that generalize to the case of instantaneous effects the known directed coherence (DC) and partial DC measures. The new measures are illustrated in theoretical examples showing that they reduce to the known measures in the absence of instantaneous causality, and describe peculiar aspects of directional interaction among multiple series when instantaneous causality is non-negligible. Then, the issue of estimating eMVAR models from time-series data is faced, proposing two approaches for model identification and discussing problems related to the underlying model assumptions. Finally, applications of the framework on cardiovascular variability series and multichannel EEG recordings are presented, showing how it allows one to highlight patterns of frequency domain causality consistent with well-interpretable physiological interaction mechanisms.

Keywords:  Granger causality; directed coherence; multivariate autoregressive models; partial directed coherence

Mesh:

Year:  2013        PMID: 23858484     DOI: 10.1098/rsta.2011.0618

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  18 in total

1.  Information Dynamics of the Brain, Cardiovascular and Respiratory Network during Different Levels of Mental Stress.

Authors:  Matteo Zanetti; Luca Faes; Giandomenico Nollo; Mariolino De Cecco; Riccardo Pernice; Luca Maule; Marco Pertile; Alberto Fornaser
Journal:  Entropy (Basel)       Date:  2019-03-13       Impact factor: 2.524

2.  Assessing causality in brain dynamics and cardiovascular control.

Authors:  Alberto Porta; Luca Faes
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2013-07-15       Impact factor: 4.226

3.  Assessing dynamic spectral causality by lagged adaptive directed transfer function and instantaneous effect factor.

Authors:  Haojie Xu; Yunfeng Lu; Shanan Zhu; Bin He
Journal:  IEEE Trans Biomed Eng       Date:  2014-07       Impact factor: 4.538

4.  Globally conditioned Granger causality in brain-brain and brain-heart interactions: a combined heart rate variability/ultra-high-field (7 T) functional magnetic resonance imaging study.

Authors:  Andrea Duggento; Marta Bianciardi; Luca Passamonti; Lawrence L Wald; Maria Guerrisi; Riccardo Barbieri; Nicola Toschi
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2016-05-13       Impact factor: 4.226

5.  A Dynamic Regression Approach for Frequency-Domain Partial Coherence and Causality Analysis of Functional Brain Networks.

Authors:  Lipeng Ning; Yogesh Rathi
Journal:  IEEE Trans Med Imaging       Date:  2017-08-14       Impact factor: 10.048

6.  Estimating brain effective connectivity from EEG signals of patients with autism disorder and healthy individuals by reducing volume conduction effect.

Authors:  Fatemeh Salehi; Mehrad Jaloli; Robert Coben; Ali Motie Nasrabadi
Journal:  Cogn Neurodyn       Date:  2021-11-02       Impact factor: 3.473

Review 7.  Brain Synchronization and Multivariate Autoregressive (MVAR) Modeling in Cognitive Neurodynamics.

Authors:  Steven L Bressler; Ashvin Kumar; Isaac Singer
Journal:  Front Syst Neurosci       Date:  2022-06-24

8.  Causality analysis of leading singular value decomposition modes identifies rotor as the dominant driving normal mode in fibrillation.

Authors:  Yaacov Biton; Avinoam Rabinovitch; Doron Braunstein; Ira Aviram; Katherine Campbell; Sergey Mironov; Todd Herron; José Jalife; Omer Berenfeld
Journal:  Chaos       Date:  2018-01       Impact factor: 3.642

9.  Granger causality analysis of rat cortical functional connectivity in pain.

Authors:  Xinling Guo; Qiaosheng Zhang; Amrita Singh; Jing Wang; Zhe Sage Chen
Journal:  J Neural Eng       Date:  2020-02-07       Impact factor: 5.379

10.  Assessing direct paths of intracortical causal information flow of oscillatory activity with the isolated effective coherence (iCoh).

Authors:  Roberto D Pascual-Marqui; Rolando J Biscay; Jorge Bosch-Bayard; Dietrich Lehmann; Kieko Kochi; Toshihiko Kinoshita; Naoto Yamada; Norihiro Sadato
Journal:  Front Hum Neurosci       Date:  2014-06-20       Impact factor: 3.169

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