Literature DB >> 23851643

Universal labeling of 5'-triphosphate RNAs by artificial RNA ligase enzyme with broad substrate specificity.

John C Haugner1, Burckhard Seelig.   

Abstract

An artificial RNA ligase specific to RNA with a 5'-triphosphate (PPP-RNA) exhibits broad sequence specificity on model substrates and secondary siRNAs with direct applications in the identification of PPP-RNAs through sequencing.

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Year:  2013        PMID: 23851643      PMCID: PMC3838195          DOI: 10.1039/c3cc44454f

Source DB:  PubMed          Journal:  Chem Commun (Camb)        ISSN: 1359-7345            Impact factor:   6.222


  23 in total

Review 1.  Joining of RNAs by splinted ligation.

Authors:  M J Moore; C C Query
Journal:  Methods Enzymol       Date:  2000       Impact factor: 1.600

2.  A complex ligase ribozyme evolved in vitro from a group I ribozyme domain.

Authors:  L Jaeger; M C Wright; G F Joyce
Journal:  Proc Natl Acad Sci U S A       Date:  1999-12-21       Impact factor: 11.205

3.  De novo synthesis and development of an RNA enzyme.

Authors:  Yoshiya Ikawa; Kentaro Tsuda; Shigeyoshi Matsumura; Tan Inoue
Journal:  Proc Natl Acad Sci U S A       Date:  2004-09-13       Impact factor: 11.205

4.  Site-specific modification of pre-mRNA: the 2'-hydroxyl groups at the splice sites.

Authors:  M J Moore; P A Sharp
Journal:  Science       Date:  1992-05-15       Impact factor: 47.728

Review 5.  The chloroplast genome.

Authors:  M Sugiura
Journal:  Plant Mol Biol       Date:  1992-05       Impact factor: 4.076

Review 6.  DNA ligase: structure, mechanism, and function.

Authors:  I R Lehman
Journal:  Science       Date:  1974-11-29       Impact factor: 47.728

Review 7.  Transcription of the mammalian mitochondrial genome.

Authors:  D A Clayton
Journal:  Annu Rev Biochem       Date:  1984       Impact factor: 23.643

8.  Deoxyribozymes with 2'-5' RNA ligase activity.

Authors:  Amber Flynn-Charlebois; Yangming Wang; Tracey K Prior; Imran Rashid; Kelly A Hoadley; Rebecca L Coppins; Amanda C Wolf; Scott K Silverman
Journal:  J Am Chem Soc       Date:  2003-03-05       Impact factor: 15.419

9.  In vitro evolution of enzymes.

Authors:  Misha V Golynskiy; John C Haugner; Aleardo Morelli; Dana Morrone; Burckhard Seelig
Journal:  Methods Mol Biol       Date:  2013

10.  Isolation of new ribozymes from a large pool of random sequences [see comment].

Authors:  D P Bartel; J W Szostak
Journal:  Science       Date:  1993-09-10       Impact factor: 47.728

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  4 in total

1.  Proximal disruptor aided ligation (ProDAL) of kilobase-long RNAs.

Authors:  Alexander Zhovmer; Xiaohui Qu
Journal:  RNA Biol       Date:  2016-05-21       Impact factor: 4.652

2.  Extensive libraries of gene truncation variants generated by in vitro transposition.

Authors:  Aleardo Morelli; Yari Cabezas; Lauren J Mills; Burckhard Seelig
Journal:  Nucleic Acids Res       Date:  2017-06-02       Impact factor: 16.971

Review 3.  De novo proteins from random sequences through in vitro evolution.

Authors:  Cher Ling Tong; Kun-Hwa Lee; Burckhard Seelig
Journal:  Curr Opin Struct Biol       Date:  2021-01-28       Impact factor: 7.786

4.  Thermostable artificial enzyme isolated by in vitro selection.

Authors:  Aleardo Morelli; John Haugner; Burckhard Seelig
Journal:  PLoS One       Date:  2014-11-13       Impact factor: 3.240

  4 in total

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