Literature DB >> 23848307

Spatial organization of fibroblast nuclear chromocenters: component tree analysis.

Robert R Snapp1, Elyse Goveia, Lindsay Peet, Nicole A Bouffard, Gary J Badger, Helene M Langevin.   

Abstract

The nuclei of mouse connective tissue fibroblasts contain chromocenters which are well-defined zones of heterochromatin that can be used as positional landmarks to examine nuclear remodeling in response to a mechanical perturbation. This study used component tree analysis, an image segmentation algorithm that detects high intensity voxels that are topologically connected, to quantify the spatial organization of chromocenters in fibroblasts within whole mouse connective tissue fixed and stained with 4',6-diamidino-2-phenylindole (DAPI). The component tree analysis method was applied to confocal microscopy images of whole mouse areolar connective tissue incubated for 30 min ex vivo with or without static stretch. In stretched tissue, the mean distance between chromocenters within fibroblast nuclei was significantly greater (vs. non-stretched, P < 0.001), corresponding to an average of a 500-nm increase in chromocenter separation (~10% strain). There was no significant difference in chromocenter number or average size between stretch and no stretch. Average chromocenter distance was positively correlated with nuclear cross-sectional area (r = 0.78, P < 0.0001), and nuclear volume (r = 0.42, P < 0.0001), and negatively correlated with nuclear aspect ratio (r = -0.65, P < 0.0001) and nuclear concavity index (r = -0.44, P < 0.0001). These results demonstrate that component trees can be successfully applied to the morphometric analysis of nuclear chromocenters in fibroblasts within whole connective tissue. Static stretching of mouse areolar connective tissue for 30 min resulted in substantially increased separation of nuclear chromocenters in connective tissue fibroblasts. This interior remodeling of the nucleus induced by tissue stretch may impact transcriptionally active euchromatin within the inter-chromocenter space.
© 2013 Anatomical Society.

Entities:  

Keywords:  chromocenters; connective tissue; fibroblast; mechanical; nucleus

Mesh:

Substances:

Year:  2013        PMID: 23848307      PMCID: PMC3884678          DOI: 10.1111/joa.12082

Source DB:  PubMed          Journal:  J Anat        ISSN: 0021-8782            Impact factor:   2.610


  20 in total

1.  Tissue stretch induces nuclear remodeling in connective tissue fibroblasts.

Authors:  Helene M Langevin; Kirsten N Storch; Robert R Snapp; Nicole A Bouffard; Gary J Badger; Alan K Howe; Douglas J Taatjes
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9.  The PHD domain of Np95 (mUHRF1) is involved in large-scale reorganization of pericentromeric heterochromatin.

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Journal:  Mol Biol Cell       Date:  2008-05-28       Impact factor: 4.138

10.  Non-specific interactions are sufficient to explain the position of heterochromatic chromocenters and nucleoli in interphase nuclei.

Authors:  S de Nooijer; J Wellink; B Mulder; T Bisseling
Journal:  Nucleic Acids Res       Date:  2009-04-09       Impact factor: 16.971

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  2 in total

1.  LINE-related component of mouse heterochromatin and complex chromocenters' composition.

Authors:  Inna S Kuznetsova; Dmitrii I Ostromyshenskii; Alexei S Komissarov; Andrei N Prusov; Irina S Waisertreiger; Anna V Gorbunova; Vladimir A Trifonov; Malcolm A Ferguson-Smith; Olga I Podgornaya
Journal:  Chromosome Res       Date:  2016-04-26       Impact factor: 5.239

2.  ERCC1-XPF cooperates with CTCF and cohesin to facilitate the developmental silencing of imprinted genes.

Authors:  Georgia Chatzinikolaou; Zivkos Apostolou; Tamara Aid-Pavlidis; Anna Ioannidou; Ismene Karakasilioti; Giorgio L Papadopoulos; Michalis Aivaliotis; Maria Tsekrekou; John Strouboulis; Theodore Kosteas; George A Garinis
Journal:  Nat Cell Biol       Date:  2017-04-03       Impact factor: 28.824

  2 in total

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